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Record W4412653696 · doi:10.1099/jgv.0.002113

Summary of taxonomy changes ratified by the International Committee on Taxonomy of Viruses (ICTV) from the Animal DNA Viruses and Retroviruses Subcommittee, 2025

2025· article· en· W4412653696 on OpenAlexaff
Arvind Varsani, Adly M. M. Abd‐Alla, Niklas Arnberg, Kelly S. Bateman, Mária Benkő, Annie Bézier, Philippe Biagini, Jamie Bojko, Anamarija Butković, Marta Canuti, V. Celer, Jean‐Michel Drezen, László Egyed, Matthias Fischer, Sarah François, Benjamin Guinet, Balázs Harrach, Robert L. Harrison, Elisabeth A. Herniou, Michael Heß, Jia Hu, Johannes A. Jehle, Győző L. Kaján, Adriana E. Kajon, Eugene V. Koonin, Simona Kraberger, Peter J. Krell, Mart Krupovìč, Jens H. Kuhn, Chengfeng Lei, Matthieu Leobold, Fabrizio Maggi, Suresh K. Mittal, Hiroaki Okamoto, Tanja Opriessnig, Xiaowei Peng, Judit J. Pénzes, Iva I. Podgorski, Thomas S. Postler, Bergmann Morais Ribeiro, Carmen San Martı́n, Maria Söderlund‐Venermo, Xiulian Sun, András Surján, Zoltán László Tarján, Julien Varaldi, Márton Z. Vidovszky, Göran Wadell, Hidemi Watanabe, Natalya Yutin, Monique M. van Oers

Bibliographic record

VenueJournal of General Virology · 2025
Typearticle
Languageen
FieldBiochemistry, Genetics and Molecular Biology
TopicVirus-based gene therapy research
Canadian institutionsUniversity of Guelph
FundersNational Institute of Allergy and Infectious DiseasesNational Institute of General Medical SciencesNational Institutes of Health
KeywordsBiologyVirus classificationTaxonomy (biology)VirologyZoologyGeneticsGenome

Abstract

fetched live from OpenAlex

The International Committee on Taxonomy of Viruses (ICTV) holds a ratification vote annually after review of newly proposed taxa by ICTV Study Groups and members of the virology community. In March 2025, the vote outcome of the 11 proposals within the mandate of the Animal DNA Viruses and Retroviruses Subcommittee was made public. Here, we provide a summary of the newly accepted proposals. These include reorganization of taxa in the realm Varidnaviria, classification of the ‘polinton-like’ viruses into a new family (Phypoliviridae) within a new order Archintovirales; establishment of a new phylum (Commensaviricota) in the kingdom Shotokuvirae; the establishment of a new family called Filamentoviridae with two new genera and three new species; the addition of four new genera in the family Anelloviridae with 70 new species; and the addition of 85 new species in the families Adenoviridae (n=16), Baculoviridae (n=5), Circoviridae (n=5), Parvoviridae (n=55) and Polyomaviridae (n=4). Also, in the family Belpaoviridae, 11 species were renamed to comply with the binomial requirement for species names.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.019
metaresearch head score (Gemma)0.034
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Not applicable · Consensus signal: Not applicable
GenreCandidate signal: Other · Consensus signal: Other
Teacher disagreement score0.029
Threshold uncertainty score0.103

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0190.034
Meta-epidemiology (narrow)0.0010.001
Meta-epidemiology (broad)0.0010.002
Bibliometrics0.0090.009
Science and technology studies0.0030.001
Scholarly communication0.0070.004
Open science0.0040.002
Research integrity0.0030.007
Insufficient payload (model declined to judge)0.0120.010

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.045
GPT teacher head0.298
Teacher spread0.253 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designNot applicable
Domainnot available
GenreOther

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations12
Published2025
Admission routes1
Has abstractyes

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