Selection of mediators and dependence structure for high-dimensional mediation analysis
Bibliographic record
Abstract
Causal mediation analysis examines the potential causal pathways between an exposure variable and outcome through intermediate variables with the goal of estimating direct and indirect effects. In practice, intermediate variables may be high-dimensional, in which case one may first aim to identify the true mediators among them. The dependence structure among mediators may then be studied with the goal of identifying a simple sufficient structure. We propose a two-stage penalized estimation procedure to meet these goals. The first stage involves selecting mediators by identifying non-zero indirect effects via a penalized regression. The second stage aims to simplify the correlation structure among selected mediators enabling the estimation of individual, grouped or joint effects. Through transformation of variables, the correlation selection problem can be reformulated as a standard LASSO problem. The two stages can be performed jointly or sequentially and we study the performance of each implementation through simulation studies. Finally, the proposed approach is applied to a psychiatry study in which the aim is to identify methylation loci that mediate the causal effect of childhood trauma on adult stress level.
Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.
How this classification was reachedexpand
Full frame machine prediction
Teacher imitationNot calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.
Distilled classifier scores by category (both heads)
| Category | Codex | Gemma |
|---|---|---|
| Metaresearch | 0.042 | 0.087 |
| Meta-epidemiology (narrow) | 0.001 | 0.001 |
| Meta-epidemiology (broad) | 0.002 | 0.003 |
| Bibliometrics | 0.001 | 0.002 |
| Science and technology studies | 0.002 | 0.002 |
| Scholarly communication | 0.002 | 0.003 |
| Open science | 0.003 | 0.005 |
| Research integrity | 0.002 | 0.004 |
| Insufficient payload (model declined to judge) | 0.008 | 0.001 |
Machine scores (provisional)
The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.
Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.
score_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from itClassification
machine, unvalidatedMachine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.
How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".