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Record W4413127492 · doi:10.1101/2025.08.10.25333397

Association of Bassoon (BSN) Gene Mutations with Gait and Motor Impairments in Parkinson’s Disease

2025· preprint· en· W4413127492 on OpenAlexaff
Prashanth Lingappa Kukkle, Ahamed P Kaladiyil, Thenral S. Geetha, Ramesh Menon, Rukmini Mridula Kandadai, Vinay Goyal, Soaham Desai, Deepika Joshi, Hrishikesh Kumar, Pettarusp M. Wadia, Adreesh Mukherjee, Niraj Kumar, Sahil Mehta, Sandeep Chargulla, Heli Shah, Vijayashankar Paramanandam, Mitesh Chandarana, Ravi Yadav, Rajinder K. Dhamija, Pramod Kumar Pal, Atanu Biswas, Ravi Gupta, Rupam Borgohain, Vedam L. Ramprasad

Bibliographic record

VenuemedRxiv · 2025
Typepreprint
Languageen
FieldMedicine
TopicNeurogenetic and Muscular Disorders Research
Canadian institutionsParkinson's Clinic of Eastern Toronto & Movement Disorders Centre
Fundersnot available
KeywordsParkinson's diseasePhysical medicine and rehabilitationGaitAssociation (psychology)DiseaseMedicineNeurosciencePsychologyInternal medicine

Abstract

fetched live from OpenAlex

Abstract Introduction Parkinson’s Disease (PD) features debilitating motor symptoms, particularly gait and balance impairments inadequately managed by current therapies. Bassoon ( BSN), a presynaptic active-zone organizer, has been implicated in various neurological disorders. Here, we evaluate the impact of rare BSN mutations on motor symptoms in PD patients. Methods Our study included 110 PD patients carrying BSN mutations and 558 PD controls from a South Asian early-onset PD cohort (onset <50 years). Variants with mean allele frequency (MAF) <0.1% were classified as “rare” (n=44). Clinical motor features were compared between variant carriers and non-carriers. Computational tools (CADD, PolyPhen-2, I-Mutant2.0, ConSurf) predicted deleteriousness, while GeneMANIA and STRING elucidated Bassoon’s functional interactions. Results Patients carrying BSN variants exhibited significantly increased freezing of gait (FOG, p=0.026, Carmer’s V=0.118), shuffling gait (SG, p=0.041, Carmer’s V=0.111), and falls (p=0.028, Carmer’s V=0.117). Rare BSN mutations clustered in the Bassoon C-terminal region (aa 3500– 3800), threefold above expected frequency. Computational predictions identified seven likely pathogenic variants (P171L, A852T, P988A, R1015H, R2561H, R3400W, L3561P), with highest confidence for P171L (confirmed by AlphaMissense). Functional analyses implicated Bassoon in axonal transport, presynaptic proteostasis, and neurotransmitter release in dopaminergic/cholinergic neurons. Conclusion Our findings identify BSN mutations as a genetic risk factor for PD-related gait and balance dysfunction, highlighting Bassoon’s role in neurotransmission. The link with Progressive Supranuclear Palsy phenotypes suggests Bassoon dysfunction could represent a convergence point between synucleinopathies and tauopathies.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.001
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Observational · Consensus signal: Observational
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.003
Threshold uncertainty score0.008

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0000.001
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0010.001
Science and technology studies0.0000.000
Scholarly communication0.0000.000
Open science0.0000.000
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0030.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.014
GPT teacher head0.288
Teacher spread0.274 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designObservational
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

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Citations0
Published2025
Admission routes1
Has abstractyes

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