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Record W4413184161 · doi:10.1002/fee.2867

Sparse genetic data limit biodiversity assessments in protected areas globally

2025· review· en· W4413184161 on OpenAlexafffund
Ivan Paz‐Vinas, Amy G. Vandergast, Chloé Schmidt, Deborah M. Leigh, Simon Blanchet, René D. Clark, Eric D. Crandall, Hanne De Kort, Jeff Falgout, Colin J. Garroway, Eleana Karachaliou, Francine Kershaw, David O’Brien, Malin L. Pinsky, Gernot Segelbacher, Rachel H. Toczydlowski, Margaret E. Hunter

Bibliographic record

VenueFrontiers in Ecology and the Environment · 2025
Typereview
Languageen
FieldBiochemistry, Genetics and Molecular Biology
TopicGenetic diversity and population structure
Canadian institutionsUniversity of ManitobaDalhousie University
FundersOffice of International Science and EngineeringU.S. Department of AgricultureDrexel UniversityNatural Sciences and Engineering Research Council of CanadaU.S. Forest ServiceU.S. Geological SurveyDirectorate for Biological SciencesNorthern Research StationCentre National de la Recherche ScientifiqueKU LeuvenDalhousie UniversityPennsylvania State UniversityNational Science Foundation
KeywordsBiodiversityLimit (mathematics)Biodiversity conservationGenetic dataGeographyEnvironmental scienceBiologyEcologyEnvironmental healthMathematicsMedicine

Abstract

fetched live from OpenAlex

Global conservation targets include protecting genetic diversity within species. Yet few studies have assessed whether protected areas (PAs) include genetically diverse populations across species globally. A first step is understanding the availability of population genetic data that could be used in these assessments. We surveyed georeferenced population‐level nuclear (as opposed to mitochondrial or plastid‐based) genetic data across continents and marine biomes (36,354 populations, 2809 species) and found substantial geographic and taxonomic gaps. Most data were concentrated in Europe and North America, with major gaps in Africa and Asia. For most taxonomic groups, data were available for <1% of described species. Globally, 52.08% of the total areal extent of PAs lacked genetically sampled populations. These gaps in data availability highlight the need for targeted genetic data collection, harmonization, and sharing to improve genetic diversity monitoring and conservation planning. Combined with proxy‐based genetic indicators, such data are needed to inform PA assessments, bolster area‐based conservation initiatives like 30 × 30, and support achievement of global genetic conservation targets.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.003
metaresearch head score (Gemma)0.004
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Observational · Consensus signal: none
GenreCandidate signal: Review · Consensus signal: Review
Teacher disagreement score0.006
Threshold uncertainty score0.019

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0030.004
Meta-epidemiology (narrow)0.0010.000
Meta-epidemiology (broad)0.0020.001
Bibliometrics0.0030.003
Science and technology studies0.0000.002
Scholarly communication0.0020.003
Open science0.0020.001
Research integrity0.0010.002
Insufficient payload (model declined to judge)0.0060.002

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.021
GPT teacher head0.256
Teacher spread0.235 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designObservational
Domainnot available
GenreReview

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations6
Published2025
Admission routes2
Has abstractyes

Explore more

Same venueFrontiers in Ecology and the EnvironmentSame topicGenetic diversity and population structureFrench-language works237,207