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Record W4413813367 · doi:10.1101/2025.08.28.672916

Diverse strains of aster yellows phytoplasma are associated with the potato leafhopper ( <i>Empoasca fabae</i> ) in Eastern Canada

2025· preprint· en· W4413813367 on OpenAlexafffundabout
A. Barrot, Joshua Molligan, Abraão Almeida Santos, Nicolas Plante, Edel Pérez‐López

Bibliographic record

VenuebioRxiv (Cold Spring Harbor Laboratory) · 2025
Typepreprint
Languageen
FieldAgricultural and Biological Sciences
TopicPhytoplasmas and Hemiptera pathogens
Canadian institutionsUniversité Laval
FundersNatural Sciences and Engineering Research Council of CanadaFonds de recherche du Québec – Nature et technologiesMinistère de l'Agriculture, des Pêcheries et de l'Alimentation
KeywordsPhytoplasmaLeafhopperBiologyAster yellowsRestriction fragment length polymorphismVector (molecular biology)CandidatusAmpliconPopulationBotanyNested polymerase chain reactionHemipteraVeterinary medicineGenotypeGeneticsPolymerase chain reaction16S ribosomal RNABacteriaGene

Abstract

fetched live from OpenAlex

ABSTRACT Phytoplasmas are cell wall–less bacteria that are transmitted by phloem-feeding insects. In Canada, insect vectors of this pathogen are leafhoppers (Hemiptera: Cicadellidae), and they can contribute to significant economic losses. As climate change alters the composition and movement of insect communities, migratory species such as the potato leafhopper ( Empoasca fabae , Harris 1841), one of the most abundant leafhoppers in Québec, may play an emerging role in phytoplasma diseases. Although E. fabae is not currently confirmed to act as a vector, its frequent presence and abundance in fields, along with its potential to acquire phytoplasmas, deserve further investigation. In this study, we tested DNA from E. fabae collected in strawberry fields for the presence of ‘Candidatus Phytoplasma’ using PCR, as well as inbred colonies for their ability to transmit this pathogen. The amplicons amplified from positive samples were cloned and sequenced to identify phytoplasma groups and subgroups. Our findings confirmed the presence of multiple Aster Yellows (16SrI-related) phytoplasma strains in E. fabae , based on phylogenetic analysis, restriction fragment length polymorphism (RFLP) profiling, and single-nucleotide polymorphism (SNP) profiles. However, the transmission assays did not show vector competence. We propose that although this leafhopper species hosts multiple, possibly new, phytoplasma subgroups, its capacity to transmit the disease remains limited and likely depends on high population density. Overall, these findings emphasize the importance of monitoring common pests like E. fabae as indicators of phytoplasma diversity in Eastern Canadian agricultural systems.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame distilled prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. Learned from the 10,348 direct Codex labels and 10,348 direct Gemma labels. Candidate is the union of thresholded teacher heads; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels or direct frontier model labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.000
Version: codex-gemma-dda1882f352aValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Observational · Consensus signal: Observational
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.451
Threshold uncertainty score0.995

Codex and Gemma teacher scores by category

CategoryCodexGemma
Metaresearch0.0000.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0010.000
Bibliometrics0.0000.001
Science and technology studies0.0000.000
Scholarly communication0.0000.000
Open science0.0010.000
Research integrity0.0000.001
Insufficient payload (model declined to judge)0.0000.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.014
GPT teacher head0.185
Teacher spread0.170 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one teacher head, not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designObservational
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations0
Published2025
Admission routes3
Has abstractyes

Explore more

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