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Record W4414081058 · doi:10.1093/cid/ciaf501

Changing Clinical and Laboratory Characteristics of Progressive Multifocal Leukoencephalopathy: A Retrospective National Cohort Study

2025· article· en· W4414081058 on OpenAlexaff
Ilaria Mainardi, Simonetta Gerevini, Andrea Gianmaria Tarantino, Riccardo Vercesi, Gaia Catalano, Maria del Carmen Garcia Martearena, Marcella Negri, Paolo Vezzulli, Arabella Bestetti, Lucia Moiola, Antonio Boschini, Andrea Calcagno, Laura Del Bono, Antonio Gallo, Maurizio Mena, Maria Cristina Moioli, Antonella Castagna, Massimo Filippi, Adriano Lazzarin, Paola Cinque, Dario Alimonti, Giulio Pezzetti, Renato Pascale, Pierluigi Viale, Davide Bertelli, Davide Minisci, Nicola De Rossi, Ruggero Capra, Barbara Castiglioni, Fabio Franzetti, Andrea Caramma, Etta Conticello, F. Patti, Alessia Zoncada, Sarah Dal Zoppo, Alessia Castellino, Maura Faraci, Stefano Rusconi, Maria Chiara Cerri, Elena Maffezzini, Salvatore Casari, Maria Buccafusca, Michele Bartoletti, Stéfania Bramanti, Jacopo Mariotti, Laura Milazzo, Spinello Antinori, Annamaria Pazzi, Maria Sessa, Giuseppe Santuccio, Simona Bossolasco, Lydia Scarfò, Simona Piemontese, Andrea Falini, Roberta Caccia, Filippo Turrini, Cristina Mussini, Giovanni Guaraldi, Paolo Bonfanti, Alessandro Soria, Silvia Bolis, Maria Aurora Carleo, Viviana Rizzo, Roberto Parrella, Elena Adelina Gabor, Erica Curti, Elena Tsantes, Patrizia Comoli, Enrico Marchioni, Francesco Barchiesi, Alessandro Ruggieri, Claudio Ferrante, Antonella Cingolani, Carlo Torti, Jacopo Olivieri, Andrea Antinori, Carmela Pinnetti, Giordano Madeddu, Alessandro Leone, Mattia Trunfio, Carlo Tascini, Maddalena Peghin, Stefano de Biase, Paolo Del Dotto

Bibliographic record

VenueClinical Infectious Diseases · 2025
Typearticle
Languageen
FieldMedicine
TopicPolyomavirus and related diseases
Canadian institutionsCARE Canada
Fundersnot available
KeywordsEpidemiologyObservational studyRetrospective cohort studyContext (archaeology)Cohort studySurvival analysis

Abstract

fetched live from OpenAlex

BACKGROUND: Progressive multifocal leukoencephalopathy (PML) is a severe demyelinating disease caused by JC polyomavirus (JCV), affecting immunocompromised individuals. We describe PML demographic, clinical, radiological, and laboratory characteristics and survival over time and according to underlying condition in a large retrospective patient cohort. METHODS: This is a retrospective cohort including Italian PML patients observed between 1987 and 2024, with known year of diagnosis and underlying disease. RESULTS: We included 456 cases with either a definite (n = 376, 82.4%) or clinico-radiological (n = 80, 17.6%) PML diagnosis. The relative frequency of human immunodeficiency virus (HIV)-associated cases decreased through four time periods (1987-1996; 1997-2004; 2005-2012; 2013-2024) from 99% to 43%, in parallel with increasing age (P < .0001), proportion of women (P < .001) and CD4+ counts (P < .001) but not cerebrospinal fluid (CSF) or plasma JCV-DNA levels at diagnosis. One-year survival probability increased from 23.8% in 1987-1996 to 59.2% in 2013-2024, with highest values in natalizumab-treated multiple sclerosis (93.8%), followed by combination antiretroviral treatment (cART)-treated HIV infection (55%), hematological malignancies (50.8%), primary immunodeficiencies (41.3%), and cART-untreated HIV infection (11.9%). At multivariate analysis excluding cART-untreated people with HIV, JCV-DNA levels in both CSF and plasma were independently associated with an increased mortality risk of 2.9% and 7.2%, respectively, for each Log increase in JCV-DNA. CONCLUSIONS: This observational study showed a changing epidemiological context over 37 years. Although survival improved over time, it remained poor even in the last decade, with a one-year survival probability of 59.2%.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame distilled prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. Learned from the 10,348 direct Codex labels and 10,348 direct Gemma labels. Candidate is the union of thresholded teacher heads; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels or direct frontier model labels.

metaresearch head score (Codex)0.001
metaresearch head score (Gemma)0.006
Version: codex-gemma-dda1882f352aValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Observational · Consensus signal: Observational
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.005
Threshold uncertainty score0.724

Codex and Gemma teacher scores by category

CategoryCodexGemma
Metaresearch0.0010.006
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0010.000
Bibliometrics0.0000.001
Science and technology studies0.0000.001
Scholarly communication0.0000.000
Open science0.0000.000
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0000.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.018
GPT teacher head0.387
Teacher spread0.369 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one teacher head, not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designObservational
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations1
Published2025
Admission routes1
Has abstractyes

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