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Experimental field trials model how the climate crisis will alter phyllosphere and carposphere fungal communities of <i>Vitis</i> sp. L’Acadie blanc across growth stages

2025· article· en· W4414260376 on OpenAlex
Andrew J.C. Blakney, Odile Carisse, Hervé Van der Heyden, Frédéric E. Pitre, Karine Pedneault

Why this work is in the frame

A frame that forgets how it found something cannot be audited. These are the routes that admitted this work.

affAt least one author lists a Canadian institution in the pinned OpenAlex snapshot.
aboutThe title or abstract carries a Canadian signal from the geographic lexicon.

Bibliographic record

VenueOENO One · 2025
Typearticle
Languageen
FieldAgricultural and Biological Sciences
TopicHorticultural and Viticultural Research
Canadian institutionsUniversité du Québec en OutaouaisCégep Saint-Jean-sur-RichelieuAgriculture and Agri-Food CanadaUniversité de MontréalEspace pour la vie
Fundersnot available
KeywordsPhyllospherePhenologyFungal DiversitySpecies richnessClimate changeRipeningViticultureEpiphyte

Abstract

fetched live from OpenAlex

The climate crisis is changing temperature regimes worldwide, threatening global viticulture and wine production, as temperature is a primary driver of grape development. In Atlantic Canada, temperatures are projected to increase, inducing premature grape ripening. This can impact their biochemical profiles and, consequently, the quality of the vines, in terms of plant health and fruit yield, and therefore the quality of the wines produced. Temperature is also a key factor in determining the composition fungal communities on the leaves (phyllosphere) and fruits (carposphere) of grape vines. Therefore, to better understand how these communities might change under potential future temperature regimes, we experimentally manipulated grapevines (Vitis sp. cv. L’Acadie blanc) in the field. We used on-the-row mini-greenhouses to increase the temperature at different developmental or phenological stages of the fruits, and across the whole season. Phyllosphere and carposphere were sampled at four developmental stages, their DNA was extracted, and the fungal communities were identified via ITS metabarcoding. We found that phyllosphere and carposphere had significantly different community composition, which remained relatively stable throughout plant development. Increased temperature treatments had the most significant effect on fungal phyllosphere communities; we observed that phyllosphere samples exposed to higher temperatures before the onset of ripening maintained fungal communities with higher species richness throughout development. Our analysis showed that the increase in fungal diversity among phyllopshere communities corresponds to enrichments in potential phytopathogenic fungal taxa. However, this increase in phyllosphere fungal diversity was not conserved at other growth stages when the leaves developed at higher temperatures for the whole season. The results of this study will contribute to better understanding the impact of the climate crisis on grapevine phyllosphere and carposphere fungal community composition and assembly. This will allow producers to better adapt to climate variability and to better understand the role that these communities could play on grapevine health.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

Full frame distilled prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. Learned from the 10,348 direct Codex labels and 10,348 direct Gemma labels. Candidate is the union of thresholded teacher heads; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels or direct frontier model labels.

metaresearch head score (Codex)0.001
metaresearch head score (Gemma)0.000
Version: codex-gemma-dda1882f352aValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Bench or experimental · Consensus signal: Bench or experimental
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.160
Threshold uncertainty score0.574

Codex and Gemma teacher scores by category

CategoryCodexGemma
Metaresearch0.0010.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0010.000
Bibliometrics0.0000.000
Science and technology studies0.0010.000
Scholarly communication0.0000.000
Open science0.0010.000
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0000.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.057
GPT teacher head0.308
Teacher spread0.251 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it