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Record W4414292282 · doi:10.1242/dev.205000

Cytokinins control secondary cell wall formation in the inflorescence stem of <i>Arabidopsis</i>

2025· article· en· W4414292282 on OpenAlexaff
Vojtěch Didi, Dominique Arnaud, Alesia Melnikava, Anna Pačínková, Radek Jupa, Radim Čegan, Jana Vašíčková, Mariana Benítez, Faride Unda, Tereza Dobisová, Willi Riber, Zuzana Dostálová, Ondřej Novák, Miroslav Strnad, Roman Hobza, Shawn D. Mansfield, Vít Gloser, Eva Budínská, Jan Hejátko

Bibliographic record

VenueDevelopment · 2025
Typearticle
Languageen
FieldAgricultural and Biological Sciences
TopicPlant Molecular Biology Research
Canadian institutionsUniversity of British Columbia
FundersMinisterstvo Školství, Mládeže a Tělovýchovy
KeywordsCytokininDownregulation and upregulationArabidopsisInflorescenceTranscription factorSignal transductionRegulation of gene expressionMeristem

Abstract

fetched live from OpenAlex

Spatiotemporal control over developmental programs is vital to all organisms. Here, we show that deficiency in cytokinin signaling or biosynthesis leads to early secondary cell wall (SCW) formation in Arabidopsis inflorescence stem that associates with precocious upregulation of an SCW transcriptional cascade controlled by NAC transcription factors (NSTs/VNDs). Cytokinin signaling through AHK2/3 and the ARR1/10/12 suppresses the expression of several NST genes and SCW formation. Exogenous cytokinin application led to fast downregulation of NST1 and NST3 (NST1/3) in the wild type and reconstituted both proper development and the apical-basal gradient of NST1/3 expression in a cytokinin-deficient mutant. AHK2 and AHK3 require functional NST1 or NST3 to control SCW initiation in the interfascicular fibers, demonstrating that cytokinins act upstream of NSTs. The premature onset of a rigid SCW biosynthesis and altered expression of NSTs due to cytokinin deficiency led to the formation of smaller tracheary elements and impaired hydraulic conductivity. We conclude that cytokinins downregulate NST genes to inhibit premature SCW formation in the apical part of the inflorescence stem, facilitating thus the development of fully functional tracheary elements and interfascicular fibers.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame distilled prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. Learned from the 10,348 direct Codex labels and 10,348 direct Gemma labels. Candidate is the union of thresholded teacher heads; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels or direct frontier model labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.000
Version: codex-gemma-dda1882f352aValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Bench or experimental · Consensus signal: none
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.751
Threshold uncertainty score0.086

Codex and Gemma teacher scores by category

CategoryCodexGemma
Metaresearch0.0000.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0000.000
Science and technology studies0.0000.000
Scholarly communication0.0000.000
Open science0.0000.000
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0000.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.013
GPT teacher head0.213
Teacher spread0.200 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one teacher head, not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designBench or experimental
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations1
Published2025
Admission routes1
Has abstractyes

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