Characterisation of ESBL-producing E. coli isolated from healthy broilers in Tunisia
Bibliographic record
Abstract
The aim of this study was to investigate the frequency of antimicrobial resistance and the rate of extended-spectrum β-lactamase (ESBL) in Escherichia coli isolated from caecum content collected in slaughterhouses located in three regions of Tunisia. E. coli isolates from chicken caecal samples, obtained using media supplemented with cefotaxime, were screened for antimicrobial susceptibility by the disk diffusion method. ESBL production was assessed by the double-disk synergy test, and the presence of β‑lactamase encoding resistance genes was evaluated by PCR. Out of 111 faecal samples, 108 samples were positive for E. coli isolated from media supplemented with cefotaxime with 70% of ESBL-producing isolates. Alarming proportions of resistance against most of the 21 tested antibiotics were observed with 90% of multidrug resistant strains. Most strains exhibited resistance to amoxicillin, cefepime, tetracycline, cephalothin, piperacillin, cefotaxime, aztreonam, streptomycin, ceftazidime, cefuroxime, chloramphenicol, and florfenicol. The same resistance patterns were found in comparison between the three chicken slaughterhouses. A high prevalence of β‑lactamase genes was observed, with bla CTX-M-G1 -ESBL in 79.6% of strains, bla TEM in 45.4%, and bla SHV in 33.3%. The bla CTX-M-G1 and bla TEM genes were significantly more frequent in strains from slaughterhouses A and C. Additionally, carbapenem resistance genes, bla OXA-48 and bla IMP , were demonstrated in 13% and 6.5% of strains, respectively. The study showed high frequency of ESBL-producing E. coli and high antibiotic resistance in broilers. Poultry farms could represent a significant reservoir of ESBL-producing bacteria, suggesting the dissemination of these pathogens to humans and environment. These findings indicate the need for achievement of control and surveillance system.
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How this classification was reachedexpand
Full frame distilled prediction
Teacher imitationNot calibrated prevalence, not ground truth. Human validation pending. Learned from the 10,348 direct Codex labels and 10,348 direct Gemma labels. Candidate is the union of thresholded teacher heads; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels or direct frontier model labels.
Codex and Gemma teacher scores by category
| Category | Codex | Gemma |
|---|---|---|
| Metaresearch | 0.000 | 0.000 |
| Meta-epidemiology (narrow) | 0.000 | 0.000 |
| Meta-epidemiology (broad) | 0.000 | 0.000 |
| Bibliometrics | 0.000 | 0.000 |
| Science and technology studies | 0.000 | 0.000 |
| Scholarly communication | 0.000 | 0.000 |
| Open science | 0.000 | 0.000 |
| Research integrity | 0.000 | 0.000 |
| Insufficient payload (model declined to judge) | 0.001 | 0.000 |
Machine scores (provisional)
The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.
Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.
score_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from itClassification
machine, unvalidatedMachine predicted; a candidate call from one teacher head, not a consensus.
How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".