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Record W4415513759 · doi:10.5376/cgg.2025.16.0024

High-Throughput Genotyping and Its Role in Accelerating Cotton Breeding

2025· article· W4415513759 on OpenAlex

Why this work is in the frame

A frame that forgets how it found something cannot be audited. These are the routes that admitted this work.

venuePublished in a venue whose home country is Canada.
no affNo Canadian affiliation: this work is invisible to an affiliation-only frame.
No Canadian affiliation. An affiliation-only frame, the usual design, would never have seen this work. It is one of the works that make the case for inverting the frame.

Bibliographic record

VenueCotton Genomics and Genetics · 2025
Typearticle
Language
FieldAgricultural and Biological Sciences
TopicResearch in Cotton Cultivation
Canadian institutionsnot available
Fundersnot available
KeywordsProteomicsFiberGeneGene expressionMutantHeat shock proteinProteomeTranscriptome

Abstract

fetched live from OpenAlex

Cotton fibers are important natural textile raw materials, and their maturation process directly affects the length, strength and quality of the fibers. However, the molecular regulatory mechanisms during the fiber maturation period remain unclear, which limits the genetic improvement of high-quality cotton varieties. To deeply reveal the protein regulatory network related to fiber maturation, in this study, Label-Free Quantitative Proteomics technology was adopted to systematically analyze the protein expression profiles in cotton fibers at different developmental stages. Further functional enrichment and protein-protein interaction network analysis indicated that cellulose synthase (CESA), sucrose synthase (SUS), peroxidase, heat shock protein, etc. play a core role in the process of fiber maturation. This study systematically analyzed the developmental biological basis of cotton fiber maturation, the types and expression characteristics of key enzymes, and verified the expression patterns of key genes through case studies. Finally, it explored the application potential of proteomics data in breeding. This research not only enriches the understanding of the maturation mechanism of cotton fibers, but also provides potential functional gene resources for molecular breeding of high-quality cotton.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

Full frame distilled prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. Learned from the 10,348 direct Codex labels and 10,348 direct Gemma labels. Candidate is the union of thresholded teacher heads; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels or direct frontier model labels.

metaresearch head score (Codex)0.001
metaresearch head score (Gemma)0.000
Version: codex-gemma-dda1882f352aValidation status: machine_predicted_unvalidated
Candidate categoriesMeta-epidemiology (narrow)
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Bench or experimental · Consensus signal: none
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.607
Threshold uncertainty score1.000

Codex and Gemma teacher scores by category

CategoryCodexGemma
Metaresearch0.0010.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0000.001
Science and technology studies0.0010.000
Scholarly communication0.0010.000
Open science0.0000.001
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0000.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.042
GPT teacher head0.278
Teacher spread0.236 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it