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Record W4415559101 · doi:10.1101/2025.10.24.684344

NCK adaptor proteins regulate clathrin-coated pit dynamics and EGF-stimulated PI3K-Akt signaling

2025· preprint· W4415559101 on OpenAlexaff
Karolina Zak, Ayshin Mehrabi, Michael G. Sugiyama, Costin N. Antonescu

Bibliographic record

VenuebioRxiv (Cold Spring Harbor Laboratory) · 2025
Typepreprint
Language
FieldBiochemistry, Genetics and Molecular Biology
TopicCellular transport and secretion
Canadian institutionsToronto Metropolitan University
Fundersnot available
KeywordsSignal transducing adaptor proteinEndocytic cycleProtein kinase BSignal transductionPI3K/AKT/mTOR pathwayCell signalingEpidermal growth factorEpidermal growth factor receptorCell

Abstract

fetched live from OpenAlex

Abstract The epidermal growth factor (EGF) receptor (EGFR) promotes cell growth, proliferation, and survival. EGF binding to EGFR activates receptor kinase activity, leading to membrane recruitment of class IA phosphoinositide-3-kinase (PI3K), thus activating Akt signaling. Clathrin-coated pits (CCPs) are plasma membrane endocytic structures that are enriched in signaling intermediates and regulate in EGF-stimulated Akt activation. The mechanisms and impact of recruitment of certain signaling molecules within the PI3K-Akt pathway to CCPs remains poorly understood. Using total internal reflection fluorescence microscopy (TIRFM), we observed that the adaptor proteins Nck1 and Nck2 are enriched within CCPs and regulate early CCP formation and maturation. Nck1 and Nck2 each support EGF-stimulated Akt phosphorylation. Notably, EGF stimulation triggers Nck-dependent enrichment of PI3K within CCPs, and perturbation of Nck adaptors suppressed cell proliferation and survival. This study identifies novel functions for Nck adaptor proteins in EGFR-mediated recruitment of PI3K-Akt signals within CCPs, Akt activation, and cell physiology.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.000
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Bench or experimental · Consensus signal: Bench or experimental
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.003
Threshold uncertainty score0.006

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0000.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0000.000
Science and technology studies0.0000.000
Scholarly communication0.0000.000
Open science0.0000.000
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0010.001

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.008
GPT teacher head0.200
Teacher spread0.192 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designBench or experimental
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations0
Published2025
Admission routes1
Has abstractyes

Explore more

Same venuebioRxiv (Cold Spring Harbor Laboratory)→Same topicCellular transport and secretion→French-language works237,207→