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Decadal manure substitution reshapes microbial communities to drive plant and microbial carbon accumulation in soil carbon fractions

2025· article· en· W4415849721 on OpenAlex
Zhengwu Wu, Yanyan Zhang, Yuchuan Fan, Changquan Wang, Yiran Li, Zed Rengel, Jianbo Shen, Edith Le Cadre, Joann K. Whalen, Xiaomei Tang

Why this work is in the frame

A frame that forgets how it found something cannot be audited. These are the routes that admitted this work.

affAt least one author lists a Canadian institution in the pinned OpenAlex snapshot.

Bibliographic record

VenueGeoderma · 2025
Typearticle
Languageen
FieldAgricultural and Biological Sciences
TopicSoil Carbon and Nitrogen Dynamics
Canadian institutionsMcGill University
FundersChengdu Science and Technology ProgramNational Key Research and Development Program of ChinaSichuan Province Science and Technology Support ProgramNational Natural Science Foundation of ChinaInternational S and T Cooperation Program of Sichuan Province
KeywordsManureLigninSoil carbonFertilizerTotal organic carbonMicrobial population biologyCarbon fibersNutrientSoil water

Abstract

fetched live from OpenAlex

The transformation of organic residues into particulate organic carbon (POC) and mineral-associated organic carbon (MAOC) governs soil organic carbon (SOC) storage and stability. However, how long-term manure use steers plant- and microbe-derived SOC fractions in paddy soils remains unclear. The SOC in paddy soil was evaluated by measuring amino sugars, lignin and enzyme activities from a 12-yr field trial (rice–wheat rotation) with no fertilizer, 100% mineral N fertilizer, and pig manure (50% and 100% replacement of N fertilizer). Compared to mineral N, the 100% pig manure treatment increased SOC by 26%, mainly through enhanced lignin input and microbial necromass accumulation, leading to significantly higher POC and MAOC levels. Manure application, compared to mineral N, promoted rice growth, which increased total organic C input and nutrient availability, thereby selectively favoring r -strategist bacteria, as reflected by a lower vanillyl acid-to-aldehyde ratio, a higher ratio of cellulose- to lignin-degrading enzyme activity, and greater lignin and bacterial necromass production. In contrast, the combined NPK and pig manure treatment increased the proportion of MAOC in total SOC by 7% compared to the 100% manure treatment, yet this came with enhanced lignin degradation, a lower bacterial phospholipid fatty acid (PLFA)/fungal PLFA ratio, and greater abundance of K -strategist fungi, resulting in less POC accumulation. These findings demonstrate that substituting mineral N with pig manure reshapes microbial community, enhancing the microbial transformation of plant- and microbe-derived residue into stable and labile SOC pools, and more effectively promotes SOC sequestration and persistence than mineral fertilization alone in paddy systems.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

Full frame distilled prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. Learned from the 10,348 direct Codex labels and 10,348 direct Gemma labels. Candidate is the union of thresholded teacher heads; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels or direct frontier model labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.000
Version: codex-gemma-dda1882f352aValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Observational · Consensus signal: none
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.608
Threshold uncertainty score0.986

Codex and Gemma teacher scores by category

CategoryCodexGemma
Metaresearch0.0000.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0000.000
Science and technology studies0.0000.000
Scholarly communication0.0000.000
Open science0.0000.000
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0000.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.020
GPT teacher head0.245
Teacher spread0.224 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it