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Record W4415893525 · doi:10.1098/rspb.2025.1045

The hidden biodiversity knowledge split in biological collections

2025· article· en· W4415893525 on OpenAlexaff
Gabriel Nakamura, Bruno Henrique Mioto Stabile, Lívia Estéfane Fernandes Frateles, Matheus Lima Araujo, Emanuel Bruno Neuhaus, Manoela Marinho, Melina de Souza Leite, Aline Richter, Liuyong Ding, Tiago Magalhães da Silva Freitas, Bruno Eleres Soares, Weferson Júnio da Graça., Mario R. Moura, José Alexandre Felizola Diniz‐Filho

Bibliographic record

VenueProceedings of the Royal Society B Biological Sciences · 2025
Typearticle
Languageen
FieldEnvironmental Science
TopicSpecies Distribution and Climate Change
Canadian institutionsUniversity of Regina
FundersFundação de Amparo à Pesquisa do Estado de GoiásConselho Nacional de Desenvolvimento Científico e Tecnológico
KeywordsBiodiversityGlobal biodiversityIdentification (biology)Face (sociological concept)Fish <Actinopterygii>Global changeBrackish water

Abstract

fetched live from OpenAlex

Ecological and evolutionary processes generate biodiversity, yet how biodiversity data are organized and shared globally can shape our understanding of these processes. We show that name-bearing type specimens-the primary reference for species identity-of all freshwater and brackish fish species are predominantly housed in Global North museums, disconnected from their countries of origin. This geographical divide creates a 'knowledge split' with consequences for biodiversity science, particularly in the Global South, where researchers face barriers in studying native species' name bearers housed abroad. Meanwhile, Global North collections remain flooded with non-native name bearers. We relate this imbalance to historical and socioeconomic factors, which ultimately restrict access to critical taxonomic reference materials and hinder global species documentation. To address this disparity, we call for international initiatives to promote fairer access to biological knowledge, including specimen repatriation, improved accessibility protocols for researchers in countries where specimens originated and inclusive research partnerships.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.040
metaresearch head score (Gemma)0.098
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Observational · Consensus signal: none
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.040
Threshold uncertainty score0.213

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0400.098
Meta-epidemiology (narrow)0.0000.001
Meta-epidemiology (broad)0.0010.000
Bibliometrics0.0060.008
Science and technology studies0.0050.012
Scholarly communication0.0100.020
Open science0.0030.018
Research integrity0.0010.002
Insufficient payload (model declined to judge)0.0090.001

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.039
GPT teacher head0.260
Teacher spread0.221 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designObservational
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations4
Published2025
Admission routes1
Has abstractyes

Explore more

Same venueProceedings of the Royal Society B Biological Sciences→Same topicSpecies Distribution and Climate Change→French-language works237,207→