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Emergence and Antimicrobial Resistance Patterns of ESBL-Producing Escherichia coli Isolated from Clinical and Subclinical Mastitis Cases in Egyptian Dairy Cattle

2025· article· en· W4415912286 on OpenAlex
Amany M. Mohamed, Mohamed Karam Ebayoumyl, Ahmad M. Allam, Hala Abdoula Ahmed Abou Zeina, Marwa Salman

Why this work is in the frame

A frame that forgets how it found something cannot be audited. These are the routes that admitted this work.

affAt least one author lists a Canadian institution in the pinned OpenAlex snapshot.

Bibliographic record

VenueEgyptian Journal of Veterinary Science · 2025
Typearticle
Languageen
FieldAgricultural and Biological Sciences
TopicMilk Quality and Mastitis in Dairy Cows
Canadian institutionsEnvironment and Climate Change Canada
FundersNational Research Centre
KeywordsMastitisAntibiotic resistanceEscherichia coliGentamicinNorfloxacinAntibioticsAmpicillinSubclinical infection

Abstract

fetched live from OpenAlex

The emergence and global spread of ESBL-producing Enterobacteriaceae is a growing public health concern. ESBL-producing E. coli ESBL-PE poses a significant health risk, particularly with the emergence of new variants carrying blaSHV, blaTEM and blaCTX-M genes. This study looked at antibiotic susceptibility, genotyping, and gene sequencing in order to discover ESBL-PE in milk from cows with subclinical and clinical mastitis in three Egyptian governorates. 186 milk samples were analyzed in this study in order to isolate E. coli and identify which ones developed ESBL Antibiotic resistance of ESBL- PE was assessed on Mueller-Hinton agar using 10 different commercial antibiotic disks. Resistance genes were genotyped using (PCR).The obtained sequences were evaluated using Chromas pro1.7 and the maximum-likelihood phylogenetic trees were constructed using MEGA11. E. coli was found in (n. 16/57) 28.07% and (n. 27/46) 58.69 %, while (ESBL- PE) were found in (13/57) 22.8% and (7/46) 15.2% with clinical mastitis and subclinical mastitis respectively. ESBL- PE showed greater resistance to ampicillin, amoxicillin and streptomycin at percentage of 91.67% while more sensitive to azithromycin , norfloxacin , and gentamicin by 83.33%. Results indicated that 8.3%, 16.7% and 8.3% of ESBL- PE were susceptible to ciprofloxacin, tetracycline, and amoxicillin. The blaTEM gene was recorded in GenBank as PQ45739. This study detected that ESBL- PE, harboring blaSHV and blaTEM antibiotic resistance genes, were identified in mastitis milk. Consistent monitoring of ESBL- PE and proactive measures are crucial to avoiding the future lay out of resistance genes.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

Full frame distilled prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. Learned from the 10,348 direct Codex labels and 10,348 direct Gemma labels. Candidate is the union of thresholded teacher heads; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels or direct frontier model labels.

metaresearch head score (Codex)0.002
metaresearch head score (Gemma)0.001
Version: codex-gemma-dda1882f352aValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Observational · Consensus signal: none
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.518
Threshold uncertainty score0.357

Codex and Gemma teacher scores by category

CategoryCodexGemma
Metaresearch0.0020.001
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0000.001
Science and technology studies0.0000.001
Scholarly communication0.0000.000
Open science0.0010.000
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0000.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.059
GPT teacher head0.326
Teacher spread0.267 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it