Empirical Study of Over-Squashing in GNNs and Causal Estimation of Rewiring Strategies
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Bibliographic record
Abstract
Graph neural networks (GNNs) have exhibited state-of-the-art performance across a wide range of domains. Yet message-passing GNNs suffer from over-squashing---exponential compression of long-range information from distant nodes---which limits expressivity. Rewiring techniques can ease this bottleneck, but their practical impacts are unclear due to the lack of a direct empirical over-squashing metric. We propose a topology-focused method for assessing over-squashing between node pairs using the decay rate of their mutual sensitivity. We then extend these pairwise assessments to graph-level statistics. Coupling these metrics with a within-graph causal design, we quantify how rewiring strategies affect over-squashing on diverse graph- and node-classification benchmarks. Our extensive empirical analyses show that most graph classification datasets suffer from over-squashing (but to various extents), and rewiring effectively mitigates it---though the degree of mitigation, and its translation into performance gains, varies by dataset and method. We also found that over-squashing is less notable in node classification datasets, where rewiring often increases over-squashing, and performance variations are uncorrelated with over-squashing changes. These findings suggest that rewiring is most beneficial when over-squashing is both substantial and corrected with restraint---while overly aggressive rewiring, or rewiring applied to minimally over-squashed graphs, is unlikely to help and may even harm performance. Our plug-and-play diagnostic tool lets practitioners decide whether rewiring is likely to pay off.
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Full frame distilled prediction
Teacher imitationNot calibrated prevalence, not ground truth. Human validation pending. Learned from the 10,348 direct Codex labels and 10,348 direct Gemma labels. Candidate is the union of thresholded teacher heads; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels or direct frontier model labels.
Codex and Gemma teacher scores by category
| Category | Codex | Gemma |
|---|---|---|
| Metaresearch | 0.000 | 0.000 |
| Meta-epidemiology (narrow) | 0.000 | 0.000 |
| Meta-epidemiology (broad) | 0.000 | 0.000 |
| Bibliometrics | 0.000 | 0.002 |
| Science and technology studies | 0.000 | 0.000 |
| Scholarly communication | 0.000 | 0.001 |
| Open science | 0.000 | 0.001 |
| Research integrity | 0.000 | 0.000 |
| Insufficient payload (model declined to judge) | 0.000 | 0.000 |
Machine scores (provisional)
The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.
Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.
score_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it