MétaCan
Menu
Back to cohort
Record W4416299752 · doi:10.1101/2025.11.12.688129

A tale of two distinct actin networks underlies the entire life cycle of focal adhesion

2025· preprint· en· W4416299752 on OpenAlexafffund
Karan Ishii, Sergey V. Plotnikov, Jian Liu

Bibliographic record

VenuebioRxiv (Cold Spring Harbor Laboratory) · 2025
Typepreprint
Languageen
FieldBiochemistry, Genetics and Molecular Biology
TopicCellular Mechanics and Interactions
Canadian institutionsUniversity of Toronto
FundersNatural Sciences and Engineering Research Council of CanadaCanadian Institutes of Health ResearchNational Institutes of HealthJohns Hopkins University
KeywordsFocal adhesionActinExtracellular matrixStress fiberContractilityCellCell migrationCell adhesionLive cell imaging

Abstract

fetched live from OpenAlex

Abstract Cell assembles focal adhesion (FA) to transmit the stress fiber (SF)-based actomyosin contraction onto the extracellular matrix (ECM) for mesenchymal migration, essential for many physiological processes ( e.g. , development and wound healing). To transmit force efficiently, both FA and SF contractility are built as “clutches” and in positive feedback with each other; conversely, the SF-engaging FA imposes a strong cell-ECM anchorage and must be disassembled timely to facilitate the cell migration. How the cell balances the two opposing roles of FA in cell migration is an open question. Particularly, it is not well-understood how a cell builds the FA de novo to clutch with SF and disassemble the clutches when needed in a coherent manner. Combining theory and experiments, we show that the entire life cycle of FA is seamlessly orchestrated by the FA-localized spatiotemporal coordination between retrograde actin flow and SF, without destroying the FA constituent molecules. Retrograde actin flow drives the centripetal growth of nascent FA, paving the way for SF engagement. The SF further stabilizes the growing FA into maturation via the positive feedback that clutches the contractility with the FA. Finally, the retrograde actin flow increase, in coupling to the local cell edge retraction, tugs the mature FA in the proximal direction that relaxes the associated SF contractility, turns off the clutching, and triggers the FA disassembly. Our finding sheds light on the organizational principles that cell streamlines the mechanochemical interplay between FA, actin cytoskeleton, and cell edge dynamics for efficient cell migration.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.001
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Bench or experimental · Consensus signal: Bench or experimental
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.002
Threshold uncertainty score0.008

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0000.001
Meta-epidemiology (narrow)0.0000.001
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0010.000
Science and technology studies0.0010.002
Scholarly communication0.0010.002
Open science0.0010.001
Research integrity0.0010.001
Insufficient payload (model declined to judge)0.0020.001

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.010
GPT teacher head0.236
Teacher spread0.226 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designBench or experimental
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations0
Published2025
Admission routes2
Has abstractyes

Explore more

Same venuebioRxiv (Cold Spring Harbor Laboratory)Same topicCellular Mechanics and InteractionsFrench-language works237,207