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Record W4416338238 · doi:10.3389/fsybi.2025.1692648

Historical paradigm shifts in defining life: from spontaneous generation and vitalism to the Pasteurian Wall and the quest for artificial creation

2025· article· en· W4416338238 on OpenAlexafffund
Nediljko Budiša, David B. Levin

Bibliographic record

VenueFrontiers in Synthetic Biology · 2025
Typearticle
Languageen
FieldArts and Humanities
TopicPhilosophy and History of Science
Canadian institutionsUniversity of Manitoba
FundersNatural Sciences and Engineering Research Council of CanadaCanada Research ChairsSveučilište u Zagrebu
KeywordsVitalismDoctrineGnosticismIdeologyParadigm shiftPoliticsPersonhoodOrganicismPosthumanismNatural (archaeology)

Abstract

fetched live from OpenAlex

For much of recorded history, the question “ Where does life come from? ” was answered with certainty: Aristotle’s doctrine of spontaneous generation and staged “ ensoulmen t” defined both natural philosophy and Christian scholasticism. Life, in this view, could spring from nonliving matter, and human personhood emerged only after a gradual developmental process. The Scientific Revolution began to unravel this consensus. Lavoisier’s chemistry embedded life within universal physical laws, while the invention of the microscope exposed previously invisible worlds. Science often advances through profound epistemic ruptures, not gradual accumulation. Individual discoveries acted as paradigm shifts that, together, constituted a non-Kuhnian revolution, redefining humanity’s understanding of nature. This study explores how successive revolutions in methods and technologies transformed both scientific and societal understandings of life’s origins. We distinguish four dimensions of their impact: technological (new instruments and techniques), ideological (emergent political and social philosophies), cultural (changes in art, literature, and everyday thought), and epistemological (shifts in what counts as knowable or real). Our analysis focuses primarily on the last, how each technological advance reconfigured the boundaries of knowledge itself. The chemical revolution, from Lavoisier’s demolition of phlogiston to Wöhler’s synthesis of urea, progressively undermined vitalism by showing that “organic” substances obey the same principles as inorganic matter. Pasteur ’s swan-neck flask experiments overthrew the millennia-old assumption of spontaneous generation and enshrined omne vivum ex ovo (“ all life comes from an egg ”) as biological dogma. Yet these advances built new intellectual boundaries, culminating in what we term the Pasteurian Wall , a barrier that has constrained experimental abiogenesis and remains unbreached today. By tracing these historical transformations, we show how revolutions in methods and technologies both expand and restrict the scope of inquiry, reshaping not only what we can investigate, but how we imagine life, its origins, and its possible artificial creation.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame distilled prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. Learned from the 10,348 direct Codex labels and 10,348 direct Gemma labels. Candidate is the union of thresholded teacher heads; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels or direct frontier model labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.000
Version: codex-gemma-dda1882f352aValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Theoretical or conceptual · Consensus signal: none
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.560
Threshold uncertainty score0.333

Codex and Gemma teacher scores by category

CategoryCodexGemma
Metaresearch0.0000.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0000.000
Science and technology studies0.0000.000
Scholarly communication0.0000.000
Open science0.0000.000
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0000.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.025
GPT teacher head0.227
Teacher spread0.202 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one teacher head, not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designTheoretical or conceptual
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations1
Published2025
Admission routes2
Has abstractyes

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