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Record W4416576228 · doi:10.1038/s41409-025-02757-1

Measurable residual mutated NPM1 before allogeneic transplant for acute myeloid leukemia

2025· article· en· W4416576228 on OpenAlexaff
Rasha W Al-Ali, Gege Gui, Niveditha Ravindra, Georgia Andrew, Devdeep Mukherjee, Zoë C. Wong, Ying Huang, Jason Gerhold, Matt Holman, Austin Jacobsen, J. D'Angelo, Jeffrey E. Miller, Karina Elias, Jeffery J. Auletta, Firas El Chaer, Steven M. Devine, Antonio Jiménez, Marcos de Lima, Mark R. Litzow, Partow Kebriaei, Wael Saber, Stephen R. Spellman, Scott L. Zeger, Kristin Page, Jerald P. Radich, R. Coleman Lindsley, Laura W. Dillon, Christopher S. Hourigan

Bibliographic record

VenueBone Marrow Transplantation · 2025
Typearticle
Languageen
FieldMedicine
TopicAcute Myeloid Leukemia Research
Canadian institutionsInstitute of Cancer Research
FundersNational Institute of Allergy and Infectious DiseasesNational Cancer InstituteNational Heart, Lung, and Blood InstituteU.S. NavyGenentechHealth Resources and Services AdministrationNational Institutes of HealthSyndax PharmaceuticalsOffice of Naval ResearchJazz PharmaceuticalsAstraZenecaTakeda Pharmaceuticals U.S.A.AmgenBill and Melinda Gates FoundationFoundation for the National Institutes of HealthGilead SciencesU.S. Department of Defense
KeywordsNPM1Myeloid leukemiaMinimal residual diseaseTransplantationLeukemiaMyeloidMutation

Abstract

fetched live from OpenAlex

NPM1 mutations ( NPM1 m), seen in ~30% of adults with acute myeloid leukemia (AML), often co-occur with FLT3 internal tandem duplication ( FLT3 -ITD) [ 1 , 2 ]. Measurable residual disease (MRD) testing in first complete remission (CR) identifies patients at high risk of relapse after allogeneic hematopoietic cell transplantation (alloHCT) [ 3 , 4 ]. Quantitative RT-PCR assays are currently recommended for NPM1 MRD testing, while FLT3 -ITD MRD testing is DNA-based using next generation sequencing (NGS) [ 5 , 6 , 7 ]. DNA-based NGS assays for NPM1 MRD testing may offer advantages over RNA, including improved template stability, accurate quantification, and high throughput capabilities, but require validation. We performed NPM1 MRD detection in blood collected from patients with AML during first CR (CR1) prior to alloHCT using a highly sensitive, commercially available DNA-based NPM1 NGS MRD assay.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame distilled prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. Learned from the 10,348 direct Codex labels and 10,348 direct Gemma labels. Candidate is the union of thresholded teacher heads; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels or direct frontier model labels.

metaresearch head score (Codex)0.001
metaresearch head score (Gemma)0.000
Version: codex-gemma-dda1882f352aValidation status: machine_predicted_unvalidated
Candidate categoriesMeta-epidemiology (narrow)
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Bench or experimental · Consensus signal: Bench or experimental
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.112
Threshold uncertainty score1.000

Codex and Gemma teacher scores by category

CategoryCodexGemma
Metaresearch0.0010.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0010.000
Bibliometrics0.0010.001
Science and technology studies0.0000.000
Scholarly communication0.0000.000
Open science0.0000.000
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0000.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.016
GPT teacher head0.295
Teacher spread0.279 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one teacher head, not a consensus.

Study designBench or experimental
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations2
Published2025
Admission routes1
Has abstractyes

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