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Record W4416734836 · doi:10.1155/jimr/9883892

Failure of γδ T Cell Recovery in the Gut With Effective Anti‐HIV Therapy

2025· article· en· W4416734836 on OpenAlexafffund
Priscila O. Barros, Stephanie C. Burke Schinkel, Brittany Haas, Tamara Berthoud, Michaeline McGuinty, D. William Cameron, Jonathan B. Angel

Bibliographic record

VenueJournal of Immunology Research · 2025
Typearticle
Languageen
FieldImmunology and Microbiology
TopicImmune Cell Function and Interaction
Canadian institutionsUniversity of OttawaOttawa Hospital
FundersNational Institutes of HealthCanadian HIV Trials Network, Canadian Institutes of Health ResearchNational Institute of Allergy and Infectious DiseasesOttawa Hospital Research InstituteCanadian Institutes of Health ResearchUniversity of Ottawa
KeywordsT cellAntiretroviral therapyFunction (biology)InflammationT lymphocyteImmune systemCytotoxic T cellCell

Abstract

fetched live from OpenAlex

Introduction Infection with HIV alters γδ T cells, and while these changes have been well documented in blood, they are less well understood in the gut. Methods Phenotype (specifically HIV coreceptor expression) and polyfunctionality, as defined by concomitant cytokine expression, were evaluated in γδ T cells in the blood and gut of effectively treated people living with HIV (PLWH) and people without HIV (PWOH). Mononuclear cells were isolated from blood and recto‐sigmoid colon biopsy tissue, and γδ T cells were evaluated by flow cytometry. Results The expression of α4β7 was significantly higher in gut‐derived γδ T cells of PLWH compared to PWOH and blood‐derived cells of both groups. The polyfunctionality profile of gut‐derived γδ T cells in PLWH was also different than that of PWOH, with significantly higher expression of IFN‐γ in the gut‐derived cells. Conclusion The alterations observed in gut‐derived γδ T cells from effectively treated PLWH suggest cellular function is not restored with prolonged antiretroviral therapy (ART) and may contribute to a chronic inflammatory state. Trial Registration: HAVARTI trial registration (ClinicalTrials.gov): NCT03147859

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame distilled prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. Learned from the 10,348 direct Codex labels and 10,348 direct Gemma labels. Candidate is the union of thresholded teacher heads; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels or direct frontier model labels.

metaresearch head score (Codex)0.002
metaresearch head score (Gemma)0.000
Version: codex-gemma-dda1882f352aValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Bench or experimental · Consensus signal: Bench or experimental
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.244
Threshold uncertainty score0.847

Codex and Gemma teacher scores by category

CategoryCodexGemma
Metaresearch0.0020.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0010.001
Science and technology studies0.0000.000
Scholarly communication0.0000.000
Open science0.0010.000
Research integrity0.0000.002
Insufficient payload (model declined to judge)0.0000.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.015
GPT teacher head0.306
Teacher spread0.291 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one teacher head, not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designBench or experimental
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations0
Published2025
Admission routes2
Has abstractyes

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