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Record W4416747677 · doi:10.1002/cbdv.202501662

Molecular Characterization and Significance of Salt‐Tolerant Alkaliphilic Actinomycetes of the Saline Habitats of Mithapur, Coastal Gujarat, India

2025· article· en· W4416747677 on OpenAlexaff
Trupti Talsania, Nishtha R. Vaghela, Sangeeta D. Gohel, Satya P. Singh

Bibliographic record

VenueChemistry & Biodiversity · 2025
Typearticle
Languageen
FieldMedicine
TopicMicrobial Natural Products and Biosynthesis
Canadian institutionsVenus Concept (Canada)
FundersSaurashtra University
Keywords16S ribosomal RNAPrimer (cosmetics)MicroorganismAmplicongenomic DNABacteriaAgarose gel electrophoresisRibosomal RNAAgaroseMicrobial ecology

Abstract

fetched live from OpenAlex

Soil salinization and alkalinization threaten agriculture and microbial diversity, driving the need for salt-tolerant and alkaliphilic microorganisms in biotechnology. The present study aimed to isolate, characterize, and assess the molecular diversity of such actinomycetes from coastal Gujarat, India, to identify candidates for biotechnological applications. Eight salt-tolerant and alkaliphilic actinomycetes were isolated from Mithapur, Gujarat (India), and confirmed to grow at 5% salt and pH 9. Their colony characteristics, in situ growth, biochemical properties, and antibiotic susceptibility were examined. To extend the study further, the genomic DNA was extracted from the cell mass to assess the molecular diversity of the actinobacteria. The quality, purity, and yield of the extracted DNA were assessed by spectroscopic analysis and agarose gel electrophoresis. The 16S rRNA genes were then amplified using five different primer sets, including two universal (U1 and U2), two Streptomyces-specific (StrepB/StrepE and StrepB/StrepF), and one Nesterenkonia-specific (NF/R) primer set. The varying number of isolates yielded expected amplicons with U1 (1500 bp), U2 (1000 bp), StrepB/StrepE (500 bp), StrepB/StrepF (1170 bp), and NF/R (1120 bp) primer sets. DGGE with the amplified 16S rRNA gene was used as a fingerprinting tool to further differentiate the actinomycetes and assess their molecular diversity, highlighting their potential for bioremediation, agriculture, and biotechnology.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame distilled prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. Learned from the 10,348 direct Codex labels and 10,348 direct Gemma labels. Candidate is the union of thresholded teacher heads; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels or direct frontier model labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.000
Version: codex-gemma-dda1882f352aValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Bench or experimental · Consensus signal: Bench or experimental
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.075
Threshold uncertainty score0.290

Codex and Gemma teacher scores by category

CategoryCodexGemma
Metaresearch0.0000.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0000.000
Science and technology studies0.0000.000
Scholarly communication0.0000.000
Open science0.0000.000
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0000.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.006
GPT teacher head0.202
Teacher spread0.195 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one teacher head, not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designBench or experimental
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations0
Published2025
Admission routes1
Has abstractyes

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