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Record W4416758622 · doi:10.1038/s41467-025-65663-6

Recessive variants in the intergenic NOS1AP-C1orf226 locus cause monogenic kidney disease responsive to anti-proteinuric treatment

2025· article· en· W4416758622 on OpenAlexafffund
Florian Buerger, Daanya Salmanullah, Lorrin Liang, Victoria C. Gauntner, Kavita Krueger, Jiansong Qi, Josée Normand, Vineeta Sharma, Adrian Ranga, Alexander Rubin, David Ball, Sunwoo Hong, Katharina Lemberg, Ken Saida, Lea Maria Merz, Sanja Sever, Biju Issac, Qianyi Ma, Liang Sun, A. Billing, Fatih Demir, Markus M. Rinschen, Björn Reusch, Bodo B. Beck, Sergio Guerrero‐Castillo, Alexis C. Gomez, Michelle T. McNulty, Matthew G. Sampson, Mohamed H. Al‐Hamed, Mohammed M. Saleh, Mohamed Shalaby, Jameela A. Kari, J. Paul Fawcett, Friedhelm Hildebrandt, Amar J. Majmundar

Bibliographic record

VenueNature Communications · 2025
Typearticle
Languageen
FieldMedicine
TopicNitric Oxide and Endothelin Effects
Canadian institutionsDalhousie University
FundersNational Center for Advancing Translational SciencesJapan Society for the Promotion of ScienceNovo Nordisk FondenElse Kröner-Fresenius-StiftungNational Institutes of HealthRare Diseases Clinical Research NetworkDeutsche ForschungsgemeinschaftAlport Syndrome FoundationNational Institute of Neurological Disorders and StrokeNovo NordiskEunice Kennedy Shriver National Institute of Child Health and Human DevelopmentAarhus UniversitetBoston Children's HospitalNational Institute of Diabetes and Digestive and Kidney DiseasesManton Center for Orphan Disease Research, Boston Children's HospitalCanadian Institutes of Health ResearchAmerican Society of Nephrology
KeywordsIntergenic regionRNA splicingGeneAlternative splicingAlleleNephrotic syndromeLocus (genetics)

Abstract

fetched live from OpenAlex

In genetic disease, an accurate expression landscape of disease genes and faithful animal models can facilitate genetic diagnoses and therapeutic advances respectively. Previously, we found that variants in NOS1AP, the gene that encodes nitric oxide synthase 1 adaptor protein, cause monogenic nephrotic syndrome. Here, we determine that an intergenic splice product of NOS1AP/Nos1ap and neighboring C1orf226/Gm7694, which prevents NOS1AP from binding to nitric oxide synthase 1, is the predominant isoform in mammalian kidney transcriptional and proteomic data. Gm7694−/− mice, whose allele exclusively disrupts the intergenic product, develop nephrotic syndrome phenotypes. In two male human subjects with nephrotic syndrome, we identify causative NOS1AP splice variants, including one predicted to abrogate intergenic splicing but initially misclassified as benign based on the canonical transcript. Finally, by modifying genetic background, we generate a faithful mouse model of NOS1AP-associated monogenic nephrotic syndrome that responds to anti-proteinuric treatment. Variants in NOS1AP can cause monogenic nephrotic syndrome. Here, the authors show that disrupting the intergenic NOS1AP splice isoform that is more prevalent in podocytes leads to monogenic kidney disease responsive to RAAS inhibition.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.000
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Observational · Consensus signal: none
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.003
Threshold uncertainty score0.008

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0000.000
Meta-epidemiology (narrow)0.0010.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0010.000
Science and technology studies0.0000.000
Scholarly communication0.0000.000
Open science0.0000.000
Research integrity0.0010.001
Insufficient payload (model declined to judge)0.0030.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.021
GPT teacher head0.348
Teacher spread0.327 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designObservational
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations0
Published2025
Admission routes2
Has abstractyes

Explore more

Same venueNature Communications→Same topicNitric Oxide and Endothelin Effects→French-language works237,207→