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Record W4416821332 · doi:10.1101/2025.11.28.691171

Chloroplast-mitochondria synergy modulates responses to iron limitation in two <i>Thalassiosira</i> diatom species

2025· preprint· W4416821332 on OpenAlexaff
Jhoanell Angulo, Clarisse Uwizeye, Pascal Albanese, Mathilde Menneteau, Stéphane Ravanel, Pierre‐Henri Jouneau, Giovanni Finazzi, Florence Courtois

Bibliographic record

VenuebioRxiv (Cold Spring Harbor Laboratory) · 2025
Typepreprint
Language
FieldEarth and Planetary Sciences
TopicMarine and coastal ecosystems
Canadian institutionsCanadian Nautical Research Society
Fundersnot available
KeywordsPhotosynthesisDiatomContext (archaeology)PhytoplanktonAlgaeBioenergeticsPrimary producers

Abstract

fetched live from OpenAlex

Abstract Iron is naturally present at low levels in modern oceans, but it remains essential for marine life. Ocean-dwelling organisms such as oceanic phytoplankton must therefore adapt to the available levels. Among phytoplankton, diatoms are a highly diverse and successful taxon that includes the Thalassiosira genus. As a group, diatoms contribute around 20% of global primary photosynthetic productivity, they have also developed specific resources allowing them to thrive in low-iron regions. However, the major biological factors underlying their success in these ocean environments remain unknown. Here, we compared two Thalassiosira species: T. oceanica from iron-poor open-ocean; and T. pseudonana , from iron-rich coastal waters. Since iron is essential for both photosynthesis and respiration, we examined the specificities of the bioenergetic machineries in these organisms using a combination of photo-physiological, proteomics, and FIB-SEM methods. We particularly focused on chloroplast-mitochondrial coupling, a mechanism deployed by diatoms to ensure optimal transfer of photosynthetic products to promote cell growth. This study of this mechanism in the context of iron limitation reveals that the two diatoms differentially remodel chloroplast compartments in response to iron limitation. Their tolerance to these conditions is also linked to distinct constitutive mitochondrial architectures.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.000
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Bench or experimental · Consensus signal: Bench or experimental
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.002
Threshold uncertainty score0.003

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0000.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0000.000
Science and technology studies0.0000.000
Scholarly communication0.0000.000
Open science0.0000.000
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0010.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.013
GPT teacher head0.212
Teacher spread0.199 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designBench or experimental
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations0
Published2025
Admission routes1
Has abstractyes

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