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Record W4417113027 · doi:10.1038/s42255-025-01413-8

Inhibition of IRAK4 by microbial trimethylamine blunts metabolic inflammation and ameliorates glycemic control

2025· article· en· W4417113027 on OpenAlexafffund
Julien Chilloux, François Brial, Amandine Everard, David Smyth, Petros Andrikopoulos, Liyong Zhang, Hubert Plovier, Antonis Myridakis, Lesley Hoyles, José María Moreno‐Navarrete, Jèssica Latorre, Viviana Casagrande, Rossella Menghini, Blerina Ahmetaj‐Shala, Christine Blancher, Laura Martínez-Gili, Selin Gencer, Jane Fearnside, Richard H. Barton, Ana Luísa Neves, Alice Rothwell, Christelle Gérard, Sophie Caldérari, Mark J. Williamson, Julian E. Fuchs, Lata Govada, Claire L. Boulangé, Saroor A. Patel, Mark Thursz, Naomi E. Chayen, Robert C. Glen, Nigel J. Gooderham, Jeremy K. Nicholson, Massimo Federici, José Manuel Fernández‐Real, Dominique Gauguier, Peter P. Liu, Patrice D. Cani, Marc‐Emmanuel Dumas

Bibliographic record

VenueNature Metabolism · 2025
Typearticle
Languageen
FieldBiochemistry, Genetics and Molecular Biology
TopicGut microbiota and health
Canadian institutionsMcGill UniversityMcGill Genome CentreUniversity of Ottawa
FundersNIHR Imperial Biomedical Research CentreEuropean Regional Development FundInstituto de Salud Carlos IIIMedical Research CouncilCanadian Institutes of Health ResearchAgència de Gestió d'Ajuts Universitaris i de RecercaWalloon excellence in life sciences and biotechnologyCentre hospitalier régional universitaire de LilleConseil Régional Hauts-de-FranceCanada First Research Excellence FundRégion Hauts-de-FranceFonds De La Recherche Scientifique - FNRSMurdoch UniversityInstitut National de Recherche pour l'Agriculture, l'Alimentation et l'EnvironnementInstitut National de la Santé et de la Recherche MédicaleUniversity of OxfordBritish Heart FoundationNational Institute for Health and Care ResearchUniversitat de GironaGovernment of CanadaRosetrees TrustInstitut MérieuxFondation Brain CanadaEuropean CommissionUniversità degli Studi di Roma Tor VergataEuropean Genomic Institute for DiabetesOntario GenomicsUniversité de LilleCHIST-ERAAustralian GovernmentUniversité Catholique de LouvainAgence Nationale de la RechercheInstitució Catalana de Recerca i Estudis AvançatsTrent UniversityWellcome TrustCentre National de la Recherche ScientifiqueNottingham Trent UniversityGenome CanadaUniversity of OttawaImperial College LondonHeart and Stroke Foundation of CanadaMcGill University
KeywordsInflammationImmune systemKinomeTLR4GlycemicMicrobiomeInsulin resistanceGlucokinaseDiabetes mellitus

Abstract

fetched live from OpenAlex

The global type 2 diabetes epidemic is a major health crisis. Although the microbiome has roles in the onset of insulin resistance (IR), low-grade inflammation and diabetes, the microbial compounds controlling these processes remain to be discovered. Here, we show that the microbial metabolite trimethylamine (TMA) decouples inflammation and IR from diet-induced obesity by inhibiting interleukin-1 receptor-associated kinase 4 (IRAK4), a central kinase in the Toll-like receptor pathway sensing danger signals. TMA blunts TLR4 signalling in primary human hepatocytes and peripheral blood monocytic cells and rescues mouse survival after lipopolysaccharide-induced septic shock. Genetic deletion and chemical inhibition of IRAK4 result in metabolic and immune improvements in high-fat diets. Remarkably, our results suggest that TMA-unlike its liver co-metabolite trimethylamine N-oxide, which is associated with cardiovascular disease-improves immune tone and glycemic control in diet-induced obesity. Altogether, this study supports the emerging role of the kinome in the microbial-mammalian chemical crosstalk.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame distilled prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. Learned from the 10,348 direct Codex labels and 10,348 direct Gemma labels. Candidate is the union of thresholded teacher heads; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels or direct frontier model labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.000
Version: codex-gemma-dda1882f352aValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Bench or experimental · Consensus signal: Bench or experimental
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.124
Threshold uncertainty score0.689

Codex and Gemma teacher scores by category

CategoryCodexGemma
Metaresearch0.0000.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0000.000
Science and technology studies0.0000.000
Scholarly communication0.0000.000
Open science0.0000.000
Research integrity0.0010.000
Insufficient payload (model declined to judge)0.0000.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.002
GPT teacher head0.238
Teacher spread0.235 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one teacher head, not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designBench or experimental
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations6
Published2025
Admission routes2
Has abstractyes

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