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Record W4417368812 · doi:10.1038/s41421-025-00847-4

A receptor-like kinase recognizes viral proteins at the trans-Golgi network/early endosome and inhibits infection in rice

2025· article· en· W4417368812 on OpenAlex

Why this work is in the frame

A frame that forgets how it found something cannot be audited. These are the routes that admitted this work.

fundA Canadian funder is recorded on the work.
no affNo Canadian affiliation: this work is invisible to an affiliation-only frame.
No Canadian affiliation. An affiliation-only frame, the usual design, would never have seen this work. It is one of the works that make the case for inverting the frame.

Bibliographic record

VenueCell Discovery · 2025
Typearticle
Languageen
FieldAgricultural and Biological Sciences
TopicPlant-Microbe Interactions and Immunity
Canadian institutionsnot available
FundersInstitute of Genetics and Developmental Biology, Chinese Academy of SciencesChinese Academy of SciencesInstitute of Zoology, Chinese Academy of SciencesNingbo UniversityInstitute of GeneticsNational Natural Science Foundation of China
KeywordsEndosomeAutophosphorylationKinaseImmune systemProtein kinase AViral proteinCytoplasmProtein kinase RIntracellularGene

Abstract

fetched live from OpenAlex

Receptor-like kinases (RLKs) reside on the cell surface and recognize apoplastic colonization by plant-infecting microbes to initiate immune responses. Whether RLKs can also recognize intracellular colonization by viruses to activate antiviral defense mechanisms in plants remains unknown. Here, we report the identification and characterization of a trans-Golgi network/early endosome (TGN/EE)-localized RLK that recognizes viral proteins and inhibits infection in rice. OsVIRK1, a cysteine-rich receptor-like kinase, promotes rice resistance to rice stripe virus (RSV), one of the most devastating viruses of rice. OsVIRK1 transcription is induced in RSV-infected rice, and its protein accumulates through autophosphorylation and redox-mediated regulation. OsVIRK1 physically interacts with the RSV coat protein (CP), a known immune elicitor, and nonstructural protein 3 (NS3), an antiviral RNA-silencing suppressor, at the TGN/EE. OsVIRK1 is required for CP-triggered defense gene expression. It phosphorylates NS3, reducing NS3 accumulation in the cytoplasm and thus repressing its activity as an RNA-silencing suppressor. Our findings suggest that OsVIRK1 recognizes viral proteins at the TGN/EE to inhibit infection by activating plant antiviral immunity and dampening viral counterdefense.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

Full frame distilled prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. Learned from the 10,348 direct Codex labels and 10,348 direct Gemma labels. Candidate is the union of thresholded teacher heads; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels or direct frontier model labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.000
Version: codex-gemma-dda1882f352aValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Bench or experimental · Consensus signal: none
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.785
Threshold uncertainty score0.672

Codex and Gemma teacher scores by category

CategoryCodexGemma
Metaresearch0.0000.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0000.000
Science and technology studies0.0000.000
Scholarly communication0.0000.000
Open science0.0000.000
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0000.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.009
GPT teacher head0.199
Teacher spread0.190 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it