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Record W4417423478 · doi:10.64898/2025.12.16.694764

Human-specific NOTCH2NL promotes astrogenesis by expanding proliferative glial progenitor states

2025· article· W4417423478 on OpenAlexfundno aff
Riina Ishiwatari, Xuanhao D. Zhou, Y. Yamauchi, Pauline Rouillard, Takuma Kumamoto, Yusuke Kishi, Kazuo Emoto, Ikuo Suzuki

Bibliographic record

VenuebioRxiv (Cold Spring Harbor Laboratory) · 2025
Typearticle
Language
FieldBiochemistry, Genetics and Molecular Biology
TopicSingle-cell and spatial transcriptomics
Canadian institutionsnot available
FundersInstitute of GeneticsSecom Science and Technology FoundationJapan Science and Technology AgencyJapan Society for the Promotion of ScienceJapan Agency for Medical Research and DevelopmentTakeda Science Foundation
KeywordsGliogenesisAstrocyteProgenitor cellNeurogenesisTranscriptomeProgenitorCerebral cortexPhenotypeGeneNeuroglia

Abstract

fetched live from OpenAlex

Abstract The human cerebral cortex contains an unusually large number of glial cells, particularly astrocytes, yet the developmental and genetic mechanisms underlying their expansion remain poorly understood. While human-specific genes have been shown to promote neuronal production during cortical development, whether such genes also regulate gliogenesis has remained unclear. Here, we identify a previously unrecognized role for the human-specific gene family NOTCH2NL in promoting astrocyte-lineage expansion. Reanalysis of human fetal single-cell transcriptomic datasets revealed that NOTCH2NL is robustly expressed along the gliogenic trajectory, from glial intermediate progenitor cells to astrocytes. Functional perturbations in a human astrocyte culture system demonstrated that NOTCH2NL is both required and sufficient for astrocyte proliferation. In vivo overexpression of NOTCH2NLB in the developing mouse cortex shifted progenitor output toward the astrocyte lineage, increasing the astrocyte-to-neuron ratio from the early postnatal period through adulthood. This phenotype was associated with an expansion of proliferative glial progenitors around birth. Single-nucleus transcriptomic profiling further showed that NOTCH2NLB suppresses neuronal gene programs while activating transcriptional modules related to cell proliferation and cellular homeostasis during gliogenesis. Together, these findings indicate that human-specific NOTCH2NL acts at a conserved developmental decision point to amplify astrocyte production. Our study extends the function of NOTCH2NL beyond neurogenesis and suggests that human lineage–specific gene duplications can modulate gliogenesis, providing a developmental mechanism that may have contributed to the coordinated expansion of neuronal and glial populations in the human cortex.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame distilled prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. Learned from the 10,348 direct Codex labels and 10,348 direct Gemma labels. Candidate is the union of thresholded teacher heads; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels or direct frontier model labels.

metaresearch head score (Codex)0.001
metaresearch head score (Gemma)0.000
Version: codex-gemma-dda1882f352aValidation status: machine_predicted_unvalidated
Candidate categoriesMeta-epidemiology (narrow)
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Bench or experimental · Consensus signal: Bench or experimental
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.034
Threshold uncertainty score0.999

Codex and Gemma teacher scores by category

CategoryCodexGemma
Metaresearch0.0010.000
Meta-epidemiology (narrow)0.0010.001
Meta-epidemiology (broad)0.0010.000
Bibliometrics0.0000.001
Science and technology studies0.0010.000
Scholarly communication0.0010.000
Open science0.0010.000
Research integrity0.0010.001
Insufficient payload (model declined to judge)0.0000.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.009
GPT teacher head0.226
Teacher spread0.216 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one teacher head, not a consensus.

Study designBench or experimental
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations0
Published2025
Admission routes1
Has abstractyes

Explore more

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