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Fast, easy and column-free procedure for the isolation of human memory B Cells (45.14)

2011· article· en· W5329024 on OpenAlexaff
Maureen Fairhurst, Jessie Z. Yu, Terry E. Thomas

Bibliographic record

VenueThe Journal of Immunology · 2011
Typearticle
Languageen
FieldImmunology and Microbiology
TopicImmune Cell Function and Interaction
Canadian institutionsStemcell Technologies
Fundersnot available
KeywordsCD19B cellAntibodyAntigenMemory B cellNaive B cellImmune systemChemistryCell biologyBiologyImmunologyT cellAntigen-presenting cell

Abstract

fetched live from OpenAlex

Abstract Human memory B cells have the unique ability to rapidly proliferate and differentiate when re-exposed to the same antigen. They can be distinguished from naïve B cells by the presence of somatic hypermutations in their Ig-V region sequences. CD27 is widely used as a marker of memory B cells because its expression correlates with the presence of such mutations. Several CD27+ memory subsets collectively make up 20-60% of peripheral B cells. Using a two-step EasySep™ method, memory CD27+ B cells are isolated from fresh or previously frozen peripheral blood nucleated cells. First, non-B cells are targeted for depletion with dextran-coated magnetic particles using a cocktail of tetrameric antibody complexes (TAC). Labeled cells are separated in an EasySep™ magnet without the use of columns and pre-enriched, unlabeled B cells are collected. Next, CD27+ B cells are selected from the pre-enriched fraction using TAC recognizing CD27 and dextran-coated magnetic particles. Labeled cells are separated and remain in the tube in the magnet while unwanted cells are poured off. The unwanted cell fraction may be used to obtain naïve B cells. The selection steps can be fully automated using RoboSep™. Starting with a frequency of 4.1 ± 1.2% CD19+CD27+ B cells, purities of 93.0 ± 3.4% (n=14) can be obtained. Isolation of memory B cells from human samples is increasingly important for the investigation of B cell signaling pathways and regulation mechanisms central to a robust immune response.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.001
metaresearch head score (Gemma)0.000
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Bench or experimental · Consensus signal: Bench or experimental
GenreCandidate signal: Methods · Consensus signal: Methods
Teacher disagreement score0.013
Threshold uncertainty score0.044

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0010.000
Meta-epidemiology (narrow)0.0020.001
Meta-epidemiology (broad)0.0010.001
Bibliometrics0.0010.001
Science and technology studies0.0010.000
Scholarly communication0.0000.000
Open science0.0010.001
Research integrity0.0010.001
Insufficient payload (model declined to judge)0.0130.020

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.018
GPT teacher head0.228
Teacher spread0.210 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designBench or experimental
Domainnot available
GenreMethods

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations0
Published2011
Admission routes1
Has abstractyes

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