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Record W609984228

Analysis of Changes in the Potato Leaf Proteome Triggered by Phosphite Reveals Functions Associated with Induced Resistance Against Phytophthora infestans

2012· article· en· W609984228 on OpenAlexvenueno aff
Sang-Hyun Lim

Bibliographic record

VenueLibrary and Archives Canada (Government of Canada) · 2012
Typearticle
Languageen
FieldAgricultural and Biological Sciences
TopicPlant Pathogens and Resistance
Canadian institutionsnot available
Fundersnot available
KeywordsPhytophthora infestansResistance (ecology)ProteomeBiologyBlightBotanyPlant disease resistanceHorticultureChemistryAgronomyGeneticsGene
DOInot available

Abstract

fetched live from OpenAlex

Exogenous chemicals can be used to stimulate induced resistance (IR), a process related to increased disease resistance of susceptible plants against a broad range of pathogens. The identification of molecular components related to IR provides an understanding of the mechanisms related to host resistance to pathogens. Environmentally friendly phosphite (Phi)-based fungicides are increasingly used in controlling oomycete pathogens such as Phytophthora infestans, causing late blight of potatoes and other solanaceous crops. Their efficacy was clearly proven by field trials carried out by a group of researchers led by Wang-Pruski. Nevertheless, the molecular mechanisms responsible for stimulation of IR by Phi-based fungicides have not been fully documented. \nIn this study, 93 differentially regulated proteins (62 up-regulated and 31 down-regulated proteins) in Phi-treated potato leaves were identified by iTRAQ-based quantitative proteomics. The majority of these differentially regulated proteins have not been previously reported. Identification of the differentially regulated proteins revealed two major molecular mechanisms related to defense and metabolism for energy generation. Defense mechanisms include the hypersensitive response (HR), reactive oxygen species pathway, salicylic acid-dependent pathway, and antimicrobial activities. Energy generating metabolisms include glycolysis, photosynthesis, and starch degradation. \nFour days post inoculation with P. infestans, the abundance of 16 of the 93 differentially regulated proteins increased significantly in the Phi-treated plants compared with that of the control plants. On the other hand, the abundance of 9 of the 93 differentially regulated proteins was decreased in the Phi-treated plants compared to that of the control plants. The abundance of the remaining 68 differentially regulated proteins was unchanged for both challenged Phi-treated and control plants. This suggests that pre-activation of proteins in Phi-treated sample before infection is essential to increase the levels of host resistance to the pathogen. Many of the 68 differentially regulated proteins that did not change after infection play roles in HR. These proteins include cathepsin B, cysteine protease inhibitors, and proteins involved in reactive oxygen species and salicylic acid pathways. Callose deposition and subcellular changes related to HR were observed in the Phi-treated plants, indicating that Phi-responsive proteins facilitate the activation of HR against the pathogen.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame distilled prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. Learned from the 10,348 direct Codex labels and 10,348 direct Gemma labels. Candidate is the union of thresholded teacher heads; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels or direct frontier model labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.000
Version: codex-gemma-dda1882f352aValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Observational · Consensus signal: none
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.792
Threshold uncertainty score0.773

Codex and Gemma teacher scores by category

CategoryCodexGemma
Metaresearch0.0000.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0000.001
Science and technology studies0.0000.000
Scholarly communication0.0000.000
Open science0.0000.000
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0000.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.007
GPT teacher head0.146
Teacher spread0.139 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one teacher head, not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designObservational
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations3
Published2012
Admission routes1
Has abstractyes

Explore more

Same venueLibrary and Archives Canada (Government of Canada)Same topicPlant Pathogens and ResistanceFrench-language works237,207