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Record W647511

Identification of a novel p73 protein binding partner, breast cancer associated 3 (BCA3), in gynecological cancer

2009· article· en· W647511 on OpenAlexaboutno aff
Thy Leung, PK Lee, C. I. Wong, Hys Ngan

Bibliographic record

Venuenot available
Typearticle
Languageen
FieldMedicine
TopicPeptidase Inhibition and Analysis
Canadian institutionsnot available
Fundersnot available
KeywordsBreast cancerCancerIdentification (biology)MedicineOncologyGynecologyInternal medicineBiology
DOInot available

Abstract

fetched live from OpenAlex

The candidate tumor suppressor gene, p73 is a member of p53 family protein. It was predicted to encode a protein with significant similarity to p53. p73 was mapped to the minimal chromosomal region of 1p36 that is recurrently deleted in many types of cancers such as neuroblastoma, breast cancer, squamous cell carcinoma and B-cell lymphoma. Unlike p53, somatic mutation of p73 gene is extremely rare. p73 exists in two forms: the N-terminal transactivation domain containing form (TAp73) and an isoform without the transactivation domain (DNp73). TAp73 exhibits growth inhibitory, tumor suppressive and pro-apoptotic functions while DNp73 promotes oncogenic activity and abolishes the functions of TAp73. Evidence from our previous finding revealed an association between p73 expression and radiosensitivity of cervical cancers and suggested that p73 might play an important role in controlling cellular radiosensitivity. In the present study, we aimed to identify cellular proteins that interact with p73 and contribute to the development of gynecological cancer. Using yeast two hybrid screening with DNp73 as a bait, we identified a Breast Cancer Associated gene 3 (BCA3) as a novel binding partner of p73. BCA3 gene is a novel protein which plays an important role in substrate localization, transcriptional regulation as well as actin cytoskeleton remodeling. Coimmunoprecipitation experiment confirmed the interaction of DNp73 and BCA3 in HEK293 cells whereas BCA3 did not interact with p53. Interestingly, differential binding affinity with BCA3 was detected between TAp73 and DNp73 isoforms. Coexpression of DNp73 and BCA3 showed colocalization of both proteins in the perinuclear region in cervical cancer cell line (SiHa). Furthermore, with RT-PCR using specific primers performed on 7 cervical cancer cell lines, 4 normal cervix cell lines, 10 ovarian cancer cell lines, 7 normal ovary cell lines and 3 endometrial cancer cell lines, BCA3 was expressed at various expression levels in most cell lines tested. Low or no BCA3 expression was detected in 4 ovarian cancer cell lines and 3 endometrial cancer cell lines. In summary, BCA3 is a novel protein binding partner of p73. It interacts with p73 but not p53 suggesting that BCA3 particularly interacts with p73 which may ultimately influence p73 functions. The differential binding affinity of BCA3 among TAp73 and DNp73 implicating that BCA3 might play a unique role in regulating the function of p73 isoforms. Further studies on the molecular mechanism between p73 and BCA3 may give insight into tumor suppressor function of p73 in gynecological cancer.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.000
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Bench or experimental · Consensus signal: Bench or experimental
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.003
Threshold uncertainty score0.008

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0000.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0000.000
Science and technology studies0.0000.000
Scholarly communication0.0000.000
Open science0.0000.000
Research integrity0.0010.000
Insufficient payload (model declined to judge)0.0020.001

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.032
GPT teacher head0.336
Teacher spread0.304 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designBench or experimental
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations0
Published2009
Admission routes1
Has abstractyes

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