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Farnesol inhibits fatty acid synthase expression and activity via a 9‐cis retinoic acid‐dependent mechanism

2006· article· en· W65982603 on OpenAlexaff
Robin E. Duncan, Michael C. Archer

Bibliographic record

VenueThe FASEB Journal · 2006
Typearticle
Languageen
FieldBiochemistry, Genetics and Molecular Biology
TopicPeroxisome Proliferator-Activated Receptors
Canadian institutionsMuscular Dystrophy CanadaUniversity of Toronto
Fundersnot available
KeywordsFarnesolRetinoic acidReceptorRetinoid X receptorFatty acid synthaseBiologyNuclear receptorBiochemistryChemistryInternal medicineEndocrinologyFatty acidTranscription factorGene

Abstract

fetched live from OpenAlex

Farnesol is a metabolite of the mevalonate/cholesterol biosynthetic pathway that is produced endogenously in cells and is also present in dietary fruits and vegetables. Recently, farnesol has been shown to inhibit de novo triglyceride synthesis in hepatocytes although the molecular mechanism mediating this effect has not been reported. We treated MCF‐7 human breast cancer cells and rat hepatocytes with farnesol and found decreased fatty acid synthase (FAS) activity that was mediated by lower mRNA and protein levels. Farnesol has previously been shown to regulate activity of the farnesoid X receptor, peroxisome proliferator‐activated receptor alpha and thyroid hormone receptor beta 1. We investigated whether regulation of these nuclear hormone receptors may mediate effects of farnesol on FAS mRNA expression in rat hepatocytes but found no evidence of regulation through these transcription factors. We did, however, observe a complete restoration of FAS mRNA levels in cells treated concomitantly with farnesol and 9‐cis retinoic acid (RA), while treatment of control cells with 9‐cis RA alone had no effect. Although decreased retinoid X receptor (RXR) beta protein levels were apparent by 48 h in cells treated with farnesol, this could not explain effects of farnesol on FAS that were observed already by 24 h. We conclude that farnesol inhibits FAS at the level of transcription and that this effect appears to be mediated by decreased RXR activation.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.000
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Bench or experimental · Consensus signal: Bench or experimental
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.002
Threshold uncertainty score0.008

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0000.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0000.000
Science and technology studies0.0000.000
Scholarly communication0.0000.000
Open science0.0000.000
Research integrity0.0000.001
Insufficient payload (model declined to judge)0.0020.001

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.008
GPT teacher head0.221
Teacher spread0.213 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designBench or experimental
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations0
Published2006
Admission routes1
Has abstractyes

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