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Record W6887580676 · doi:10.17169/refubium-46682

The seventh blind test of crystal structure prediction: structure ranking methods

2024· article· en· W6887580676 on OpenAlexfundno aff

Bibliographic record

VenueRefubium (Universitätsbibliothek der Freien Universität Berlin) · 2024
Typearticle
Languageen
FieldMaterials Science
TopicMachine Learning in Materials Science
Canadian institutionsnot available
FundersArmy Research LaboratoryArmy Research OfficeDivision of ChemistryDivision of Materials ResearchJapan Society for the Promotion of ScienceHrvatska Zaklada za ZnanostScience and Technology Facilities CouncilResearch Institute for Information Technology, Kyushu UniversityNatural Sciences and Engineering Research Council of CanadaArgonne National LaboratoryOak Ridge Institute for Science and EducationOffice of ScienceBill and Carol Fox Center for Humanistic Inquiry, Emory UniversityFundación para el Fomento en Asturias de la Investigación Científica Aplicada y la TecnologíaRussian Science FoundationUniversity of SouthamptonWorkforce Development for Teachers and ScientistsGrantová Agentura České RepublikyXtalPiKhalifa University of Science, Technology and ResearchDell EMCKarl-Franzens-Universität GrazDeutsche ForschungsgemeinschaftEngineering and Physical Sciences Research CouncilAgencia Estatal de InvestigaciónOak Ridge Associated UniversitiesEli Lilly and CompanyU.S. Department of EnergyEuropean CommissionUniversity of ReadingNational Science Foundation
KeywordsRanking (information retrieval)Crystal structure predictionCrystal structureRange (aeronautics)Experimental dataFunction (biology)Crystal (programming language)

Abstract

fetched live from OpenAlex

A seventh blind test of crystal structure prediction has been organized by the Cambridge Crystallographic Data Centre. The results are presented in two parts, with this second part focusing on methods for ranking crystal structures in order of stability. The exercise involved standardized sets of structures seeded from a range of structure generation methods. Participants from 22 groups applied several periodic DFT-D methods, machine learned potentials, force fields derived from empirical data or quantum chemical calculations, and various combinations of the above. In addition, one non-energy-based scoring function was used. Results showed that periodic DFT-D methods overall agreed with experimental data within expected error margins, while one machine learned model, applying system-specific AIMnet potentials, agreed with experiment in many cases demonstrating promise as an efficient alternative to DFT-based methods. For target XXXII, a consensus was reached across periodic DFT methods, with consistently high predicted energies of experimental forms relative to the global minimum (above 4 kJ mol−1 at both low and ambient temperatures) suggesting a more stable polymorph is likely not yet observed. The calculation of free energies at ambient temperatures offered improvement of predictions only in some cases (for targets XXVII and XXXI). Several avenues for future research have been suggested, highlighting the need for greater efficiency considering the vast amounts of resources utilized in many cases.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.084
metaresearch head score (Gemma)0.201
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesMetaresearch
Consensus categoriesnone
DomainCandidate signal: Evaluation · Consensus signal: none
Study designCandidate signal: Simulation or modeling · Consensus signal: none
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.916
Threshold uncertainty score0.445

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0840.201
Meta-epidemiology (narrow)0.0020.001
Meta-epidemiology (broad)0.0020.004
Bibliometrics0.0030.002
Science and technology studies0.0040.004
Scholarly communication0.0040.004
Open science0.0040.005
Research integrity0.0060.004
Insufficient payload (model declined to judge)0.0150.009

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.010
GPT teacher head0.276
Teacher spread0.266 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

Study designSimulation or modeling
DomainEvaluation
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations0
Published2024
Admission routes1
Has abstractyes

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