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Additional file 1 of Toward in vivo proof of binding of 18F-labeled inhibitor [18F]TRACK to peripheral tropomyosin receptor kinases

2022· article· en· W6920930342 on OpenAlexaff

Bibliographic record

VenueFigshare · 2022
Typearticle
Languageen
FieldMedicine
TopicAdipose Tissue and Metabolism
Canadian institutionsAtuka (Canada)University Health NetworkMcGill UniversityUniversity of Alberta
Fundersnot available
KeywordsTropomyosin receptor kinase AAdipose tissueKnockout mouseTropomyosin receptor kinase BImmunohistochemistryIn vivoKinaseWhite adipose tissue

Abstract

fetched live from OpenAlex

Additional file1. Fig. S1. Brain uptake of [18F]TRACK in control and 50% TrkB knockout mice from dynamic PET experiments. Representative images at 30 min post injection and time-activity curves over 120 min time course; Fig. S2. TrkA and TrkB protein expression in mouse brain. Immunohistochemical staining in slices from a KM12 tumor bearing athymic mouse and a control wild-type B619SF2/J mouse; Fig. S3. Uptake of [18F]TRACK into brown adipose tissue (BAT). Time activity curves for BAT tissue in control wild-type B6129SF2/J mice and B6129S2-Ntrk2tm1Bbd/J 50% TrkB knockout mice over 120 min time course. Fig. S4. Muscle uptake of [18F]TRACK in KM12 tumor bearing mice. Effect of 15 mg/kg amitriptyline on the time-activity curve over 60 min time course. Fig. S5. Original full gel for the protein expression of TrkA and TrkB. Data are shown in samples from KM12 tumor tissue, brown adipose tissue (BAT), white adipose tissue (AT) and the whole brain from KM12-tumor bearing mice, control wild-type B6129SF2/J mice and B6129S2-Ntrk2tm1Bbd/J 50% TrkB knockout mice.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.003
metaresearch head score (Gemma)0.019
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesInsufficient payload (model declined to judge)
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Bench or experimental · Consensus signal: none
GenreCandidate signal: Dataset · Consensus signal: Dataset
Teacher disagreement score0.907
Threshold uncertainty score0.132

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0030.019
Meta-epidemiology (narrow)0.0020.001
Meta-epidemiology (broad)0.0020.001
Bibliometrics0.0020.002
Science and technology studies0.0010.000
Scholarly communication0.0020.002
Open science0.0030.001
Research integrity0.0020.001
Insufficient payload (model declined to judge)0.9070.279

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.032
GPT teacher head0.269
Teacher spread0.237 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

Study designBench or experimental
Domainnot available
GenreDataset

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations0
Published2022
Admission routes1
Has abstractyes

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