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Additional file 1 of Functional identification of potential non-canonical N-glycosylation sites within Cav3.2 T-type calcium channels

2020· article· en· W6920932112 on OpenAlexaff

Bibliographic record

VenueFigshare · 2020
Typearticle
Languageen
FieldBiochemistry, Genetics and Molecular Biology
TopicIon channel regulation and function
Canadian institutionsUniversity of Calgary
Fundersnot available
KeywordsElectrophysiologyDepolarizationChannel (broadcasting)Time constantAnalytical Chemistry (journal)Steady state (chemistry)Voltage-dependent calcium channelMembrane potential

Abstract

fetched live from OpenAlex

Additional file 1. Figure S1 Electrophysiological properties of Cav3.2 channel variants. a Mean normalized voltage-dependence of activation for wild-type (WT) Cav3.2 channels (black circles), and N258Q (blue circles), N335Q (green circles), N345Q (purple circles), N1780Q (orange circles). b Corresponding mean half-activation potential values obtained from the fit of the activation curves with a modified Boltzmann equation. c-d Legend same as for (a-b) but for the voltage-dependence of steady state inactivation. e Mean normalized recovery from inactivation kinetics. f Corresponding mean time constant values of recovery from inactivation obtained from the fit of the recovery curves with a single-exponential function. Figure S2 Effect of nickel on Cav3.2 channel variants. a Representative T-type current traces recorded from tsA-201 cells expressing wild-type (WT, black traces), N345Q (purple traces) and N1780Q (orange traces) Cav3.2 variants recorded in response to 150 ms depolarizing steps to -20 mV from a holding potential of -100 mV before (Ctrl) and after application of 50 μM nickel (Ni+). b Corresponding mean peak current inhibition.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.002
metaresearch head score (Gemma)0.017
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesInsufficient payload (model declined to judge)
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Bench or experimental · Consensus signal: none
GenreCandidate signal: Other · Consensus signal: none
Teacher disagreement score0.906
Threshold uncertainty score0.134

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0020.017
Meta-epidemiology (narrow)0.0010.001
Meta-epidemiology (broad)0.0020.001
Bibliometrics0.0020.003
Science and technology studies0.0010.000
Scholarly communication0.0020.002
Open science0.0030.001
Research integrity0.0010.001
Insufficient payload (model declined to judge)0.9060.245

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.039
GPT teacher head0.245
Teacher spread0.205 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

Study designBench or experimental
Domainnot available
GenreOther

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations0
Published2020
Admission routes1
Has abstractyes

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