Data from: Extra-pair offspring are less heterozygous than within-pair offspring in American redstarts (Setophaga ruticilla)
Bibliographic record
Abstract
The vast majority of bird species are socially monogamous; however, extra-pair paternity is nearly ubiquitous and a number of theories have been proposed to explain the prevalence of this mixed mating strategy. Here, we test the genetic compatibility hypothesis—the idea that females that are genetically similar to their social partners will mate with extra-pair males that are genetically dissimilar to produce offspring that are more heterozygous. For this study, we examined eight years of paternity data (2004-2011) from a Nearctic-Neotropical migratory bird, the American Redstart (Setophaga ruticilla), breeding in southeastern Ontario, Canada. We predicted that females paired with genetically similar males (higher relatedness) would be more likely to produce extra-pair offspring and that extra-pair offspring would have higher levels of heterozygosity than within-pair offspring. Alternatively, because this population experiences high levels of immigration, females may produce extra-pair offspring with more genetically similar males because of the potential for outbreeding depression. Using five highly variable microsatellite markers, we examined patterns of relatedness among social pairs as well as measures of offspring heterozygosity. In contrast to our predictions, we found no difference in relatedness between social pairs where the females produced extra-pair offspring and social pairs where the females produced only within-pair offspring. However, extra-pair offspring were significantly less heterozygous than within-pair offspring. Together, these findings suggest that females a) are not engaging in extra-pair fertilizations based on relatedness to their social mate and b) appear to be mating with extra-pair males that are more genetically similar to themselves. We suggest there may be benefits for females to mate with genetically similar extra-pair males in highly outbred populations with high rates of immigration, such as for maintaining co-adapted gene complexes or genes coding for local adaptations.
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How this classification was reachedexpand
Full frame machine prediction
Teacher imitationNot calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.
Distilled classifier scores by category (both heads)
| Category | Codex | Gemma |
|---|---|---|
| Metaresearch | 0.000 | 0.001 |
| Meta-epidemiology (narrow) | 0.000 | 0.000 |
| Meta-epidemiology (broad) | 0.000 | 0.000 |
| Bibliometrics | 0.000 | 0.000 |
| Science and technology studies | 0.000 | 0.000 |
| Scholarly communication | 0.000 | 0.000 |
| Open science | 0.000 | 0.000 |
| Research integrity | 0.000 | 0.000 |
| Insufficient payload (model declined to judge) | 0.001 | 0.000 |
Machine scores (provisional)
The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.
Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.
score_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from itClassification
machine, unvalidatedMachine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.
How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".