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Record W6929650010 · doi:10.5061/dryad.96n24g7

Data from: Extra-pair offspring are less heterozygous than within-pair offspring in American redstarts (Setophaga ruticilla)

2019· dataset· en· W6929650010 on OpenAlexaffabout

Bibliographic record

VenueData Archiving and Networked Services (DANS) · 2019
Typedataset
Languageen
FieldBiochemistry, Genetics and Molecular Biology
TopicGenomics and Chromatin Dynamics
Canadian institutionsEnvironment and Climate Change CanadaQueen's UniversityThompson Rivers University
Fundersnot available
KeywordsOffspringInbreedingMatingPopulationLoss of heterozygosityOutbreeding depressionSociobiology

Abstract

fetched live from OpenAlex

The vast majority of bird species are socially monogamous; however, extra-pair paternity is nearly ubiquitous and a number of theories have been proposed to explain the prevalence of this mixed mating strategy. Here, we test the genetic compatibility hypothesis—the idea that females that are genetically similar to their social partners will mate with extra-pair males that are genetically dissimilar to produce offspring that are more heterozygous. For this study, we examined eight years of paternity data (2004-2011) from a Nearctic-Neotropical migratory bird, the American Redstart (Setophaga ruticilla), breeding in southeastern Ontario, Canada. We predicted that females paired with genetically similar males (higher relatedness) would be more likely to produce extra-pair offspring and that extra-pair offspring would have higher levels of heterozygosity than within-pair offspring. Alternatively, because this population experiences high levels of immigration, females may produce extra-pair offspring with more genetically similar males because of the potential for outbreeding depression. Using five highly variable microsatellite markers, we examined patterns of relatedness among social pairs as well as measures of offspring heterozygosity. In contrast to our predictions, we found no difference in relatedness between social pairs where the females produced extra-pair offspring and social pairs where the females produced only within-pair offspring. However, extra-pair offspring were significantly less heterozygous than within-pair offspring. Together, these findings suggest that females a) are not engaging in extra-pair fertilizations based on relatedness to their social mate and b) appear to be mating with extra-pair males that are more genetically similar to themselves. We suggest there may be benefits for females to mate with genetically similar extra-pair males in highly outbred populations with high rates of immigration, such as for maintaining co-adapted gene complexes or genes coding for local adaptations.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame distilled prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. Learned from the 10,348 direct Codex labels and 10,348 direct Gemma labels. Candidate is the union of thresholded teacher heads; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels or direct frontier model labels.

metaresearch head score (Codex)0.001
metaresearch head score (Gemma)0.000
Version: codex-gemma-dda1882f352aValidation status: machine_predicted_unvalidated
Candidate categoriesMeta-epidemiology (narrow)
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Not applicable · Consensus signal: Not applicable
GenreCandidate signal: Dataset · Consensus signal: Dataset
Teacher disagreement score0.276
Threshold uncertainty score0.999

Codex and Gemma teacher scores by category

CategoryCodexGemma
Metaresearch0.0010.000
Meta-epidemiology (narrow)0.0010.001
Meta-epidemiology (broad)0.0010.000
Bibliometrics0.0000.000
Science and technology studies0.0000.000
Scholarly communication0.0000.000
Open science0.0050.007
Research integrity0.0000.001
Insufficient payload (model declined to judge)0.0000.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.028
GPT teacher head0.260
Teacher spread0.232 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one teacher head, not a consensus.

Study designNot applicable
Domainnot available
GenreDataset

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations1
Published2019
Admission routes2
Has abstractyes

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