Table 1 in New and interesting species of Penicillium (Eurotiomycetes, Aspergillaceae) in freshwater sediments from Spain
Bibliographic record
Abstract
Table 1. Strain information and GenBank/EMBL accession numbers of the Penicillium species investigated in this study. SpeciesSectionStrain no.1Substrate and OriginGenBank nucleotide accession no.2:Citationtub 2cmdAITSrpb 2P. ausonanumLanata - DivaricataFMR 16948TFluvial sediment, stream of the Guilleries National Park, Barcelona, Catalonia, SpainLR655809LR655810LR655808LR655811This studyP. guarroiGracilentaFMR 17747TFluvial sediment, Brugent River, Tarragona, Catalonia, SpainLR814134LR814140LR814139LR814145This studyP. heteromorphumExilicaulisCBS 226.89TSoil, ChinaKJ834455KP016786KC411702JN406605Visagie et al. 2014aExilicaulisFMR 18043Fluvial sediment, stream of the Cadí-Moixerò Natural Park, Lleida, Catalonia, SpainLR861780LR861782LR861783LR861784This studyP. irregulareCanescentiaFMR 17859TFluvial sediment, Miraflores River, Community of Madrid, SpainLR814144LR814151LR814181LR814182This studyP. sanguifluumCitrinaCBS 127032TSoil, Calahonda, Costa del Sol, SpainJN606819JN606555JN617681-Houbraken et al. 2011CitrinaFMR 17617Fluvial sediment, Mallorca Island, SpainLR861778LR861781LR861779-This studyCitrinaFMR 17619Fluvial sediment, Mallorca Island, SpainOU375375---This studyP. sicorisParadoxaFMR 18076TFluvial sediment, Segre River, Lleida, Catalonia, SpainLR884494LR884496LR884497LR884495This studyP. submersumRobsamsoniaFMR 17140TFluvial sediment, stream of the Montsant Natural Park, Tarragona, Catalonia, SpainLR814187LR814188LR814194LR814195This studyP. tardochrysogenumChrysogenaCBS 132200 TSoil, McMurdo Dry Valley, AntarcticaJX996898JX996239JX997028JX996634Houbraken et al. 2012ChrysogenaFMR 17137Fluvial sediment, stream of the Montsant Natural Park, Tarragona, Catalonia, SpainHG996463HG996465HG996464-This studyP. vaccaeorumCitrinaCBS 148.83TSandy soil under pine tree, Valladolid, SpainJN606846JN606543MH861558-Houbraken et al. 2011CitrinaFMR 17967Fluvial sediment, Basque Country, SpainLR814226LR814227LR814235-This studyCitrinaFMR 17531Fluvial sediment, stream of Montseny National Park, Barcelona, SpainLR814203LR814204LR814213-This studyCitrinaFMR 17534Fluvial sediment, stream of Montseny National Park, Barcelona, SpainOU375168OU375273OU375272-This studyCitrinaFMR 17616Fluvial sediment, stream of Serra de Tramontana, Mallorca, SpainLR814212LR814218LR814217-This studyCitrinaFMR 18100Fluvial sediment, Segre River, Lleida, SpainLR814234LR814242LR814241-This studyCitrinaFMR 18123Fluvial sediment, Segre River, Lleida, SpainLR814265LR814264LR814273-This studyCitrinaCBS 110.64Forest soil, Erzurum, TurkeyJN606829JN606533MH858377-Houbraken et al. 2011CitrinaCBS 441.88Sandy soil, ChileJN606846JN606568--Houbraken et al. 2011CitrinaCBS 643.73Sandy soil, Manitoba, Canada-JN606576--Houbraken et al. 2011CitrinaCBS 644.73Sandy soil, Manitoba, CanadaLR814213JN606577--Houbraken et al. 2011CitrinaCBS 685.85 (Type of P. lacussarmientei)Sandy soil, Torres del Paine National Park, Tierra del Fuego, ChileJN606855JN606533JN617711-Houbraken et al. 2011CitrinaCBS 300.67Sandy greenhouse soil, The Netherlands-JN606561--Houbraken et al. 2011CitrinaCBS 127029Forest soil, Los Alerces National Park, ArgentinaJN606814-MH864309-Houbraken et al. 2011CitrinaCBS 118024Ants (Camponotus spp.), New Brunswick, CanadaJN606833JN606537--Houbraken et al. 2011 CBS: Culture collection of the Westerdijk Fungal Biodiversity Institute, Utrecht, The Netherlands; FMR: Facultat de Medicina i Ciències de la Salut, Reus, Spain. T Indicate ex-type strains. 1 Strain no.: strain number. 2 tub 2: β-tubulin; cmdA: calmodulin; ITS: Internal transcribed spacer regions of the rDNA and 5.8S region; rpb 2: the DNA dependent RNA polymerase II largest subunit. Novelties and sequences generated in this study are in bold.
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How this classification was reachedexpand
Full frame machine prediction
Teacher imitationNot calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.
Distilled classifier scores by category (both heads)
| Category | Codex | Gemma |
|---|---|---|
| Metaresearch | 0.001 | 0.001 |
| Meta-epidemiology (narrow) | 0.001 | 0.000 |
| Meta-epidemiology (broad) | 0.001 | 0.001 |
| Bibliometrics | 0.004 | 0.005 |
| Science and technology studies | 0.001 | 0.000 |
| Scholarly communication | 0.001 | 0.001 |
| Open science | 0.001 | 0.001 |
| Research integrity | 0.000 | 0.001 |
| Insufficient payload (model declined to judge) | 0.014 | 0.005 |
Machine scores (provisional)
The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.
Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.
score_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from itClassification
machine, unvalidatedMachine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.
How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".