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Record W6931519529 · doi:10.5281/zenodo.7829420

Marasmius siccus Fr.

2022· article· en· W6931519529 on OpenAlexaffabout

Bibliographic record

VenueZenodo (CERN European Organization for Nuclear Research) · 2022
Typearticle
Languageen
FieldMedicine
TopicFerroptosis and cancer prognosis
Canadian institutionsRoyal Ontario Museum
Fundersnot available
KeywordsPileusHolotypeBasidiocarpAgaricalesBasidiumAgaricomycetes

Abstract

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Marasmius siccus (Schwein.) Fr. Epicrisis Systematis Mycologici, seu Synopsis Hymenomycetum: 382 (Fries 1838). — Type: United States. North Carolina (Salem) or Pennsylvania (Bethlehem): “Salem-Beth.”, Schweinitz, no date (holo-,PH[PH00062046]) (based on Desjardin [1989]). Agaricus siccus Schwein., Schriften der Naturforschenden Gesellschaft zu Leipzig 1: 84 (Schweinitz 1822). Chamaeceras siccus (Schwein.) Kuntze, Revisio generum plantarum (Leipzig) 3 (3): 457 (Kuntze 1898). REFERENCE STRAINS. — United States. Tennessee, 19.VII.1991, D.E. Desjardin DED5255 (SFSU[SFSU-F-029078]; GenBank: FJ431272); J.N. Hill JNH010 (TENN[TENN-F-070783]; GenBank: MF686511) as Marasmius fulvoferrugineus; V. Antonín (BRNM[BRNM 552709]; GenBank: HQ607384), published in Antonín et al. (2012). REMARKS Marasmius siccus s. str. regards DED5255, a topotype specimen collected and determined by Dr Dennis E. Desjardin, as the most authentic for the species in the phylogenetic trees (Figs 1; 2). The species is known by the umbrella-like basidiomata (the orange pinwheel) that are somewhat larger and more robust than M. haematocephalus, with a membranous, radially sulcate, yellow-orange-brown pileus (2.5-27 mm diam.) with darker center, a filiform to cylindrical, glabrous, brown stipe ([17-]23-62[-85] × 0.2-1.25 mm) with a floccose basal mycelium, and distant, whitish (15-22) lamellae (lamellulae often absent or 1-2) (Gilliam 1976; Desjardin 1989). Desjardin (1989: 671-674) revised the holotype that singly had oblong, 15.2-20.4 × 3.4-4 µm (n = 13) basidiospores, refractive, well-developed, 32-56 × 5.5-8 µm pleurocystidia, and a pileipellis composed of orangish to brownish Siccustype broom cells. His review of the type specimen (Desjardin 1989: 671-674) as well as the description based on fresh collections (Desjardin 1989: 246-249) agreed with Gilliam (1976), especially in the dimensions of basidiospores (15.2- 20.8 × 3.2-4.6 µm vs [13.3-]16-21[-23] × 2.8-4.2[-5] µm, respectively) and of pleurocystidia (32-60 × 5-9 µm vs 23-67[- 81] × 3-14 µm, respectively). Besides the holotype, examined collections from the United States included in Desjardin (1989) were from Connecticut, Delaware, Idaho, Illinois, Indiana, Kansas, Maryland, Michigan, Minnesota, Nebraska, New Hampshire, New York, North Carolina, Ohio, Pennsylvania, Rhode Island, Tennessee, Vermont, Virginia, West Virginia, Wisconsin, along with one collection from Japan. Gilliam (1976) also included to the list of states in United States collections from the District of Columbia, Massachusetts and Missouri, besides collections from Ontario (Canada) and Japan. So, the North American collections are the preferred starting point to delimit M. siccus. The pantemperate species concept recognizes the taxon as widespread across the subarctic, boreal and temperate zone of the northern hemisphere with circumpolar distribution (Noordeloos 1987; Antonín & Noordeloos 2010) based on collections from Canada, Finland, Norway, Republic of Korea, Russia, Sweden, and United States. This pantemperate M. siccus would cover specimens with larger spores (15-23 × 4-5 µm in Noordeloos [1987] and 15-23.5 × [2.5-]3-4.5[-5] µm in Antonín & Noordeloos [2010]) and larger pleurocystidia (25-70 × 5-10 µmNoordeloos [1987] and 25-80 × 5-21.5 µm in Antonín & Noordeloos [2010]) than those predominantly from North America (Gilliam 1976; Desjardin 1989). Noordeloos (1987) and Antonín & Noordeloos (2010) also included collections from North America that should be M. siccus s. str. This species has been referred as a very variable species, or with a broad concept, or one of the most misapplied binomials of Marasmius (Gilliam 1976; Desjardin 1989; Antonín & Noordeloos 2010), usually confused with M. bellipes Morgan, M. borealis Gilliam, M. glabellus Peck, M. ferrugineus, M. fulvoferrugineus Gilliam, M. pulcherripes and M. robinianus Gilliam. Based on nrITS, the Nearctic M. siccus s. str. (DED5255) is 1.6-3.5 dissimilar to the Palearctic M. siccus lineages. Strains of M. siccus s. str. without preserved basidiomata collection, solely based on the GenBank accessions are: GU328526 (United States, Michigan, 44°48’N, 85°48’W, date unshown, environmental sample “man22_litter_H12” in Edwards & Zak [2010]). Dedicated to the M. siccus complex, a review study of the involved collections in the phylogenetic analyses herein and/or fresh collections should be carried out considering M. siccus s. str. and the other close/cryptic species across the temperate zone based on siccus_cp1 (Figs 1; 2).

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.000
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Observational · Consensus signal: none
GenreCandidate signal: Empirical · Consensus signal: none
Teacher disagreement score0.017
Threshold uncertainty score0.057

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0000.000
Meta-epidemiology (narrow)0.0010.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0020.001
Science and technology studies0.0010.000
Scholarly communication0.0000.001
Open science0.0000.001
Research integrity0.0010.000
Insufficient payload (model declined to judge)0.0170.010

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.039
GPT teacher head0.260
Teacher spread0.221 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designObservational
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

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Citations0
Published2022
Admission routes2
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