Additional file 2 of Statistical power in COVID-19 case-control host genomic study design
Bibliographic record
Abstract
Additional file 2: Supplementary Figures and Tables. Figure S1. Statistical power to detect associations between genetic variants and infection susceptibility at the genome-wide significance level (5e-8) when the test sensitivity is low (sensitivity = 0.7). Figure S2. Statistical power to detect a true association between a genetic variant and COVID-19 disease severity at the genome-wide significance level (5e-8). Figure S3. Statistical power to detect a true association between a genetic variant and COVID-19 disease severity at the genome-wide significance level (5e-8) when varying the case-control ratio. Table S1. Relative reduction in sample size, 1 − n test _ positive _ controls n population _ controls $$ 1-\frac{n_{test\_ positive\_ controls}}{n_{population\_ controls}} $$ , from using test-positive controls compared to population-based controls.
Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.
How this classification was reachedexpand
Full frame distilled prediction
Teacher imitationNot calibrated prevalence, not ground truth. Human validation pending. Learned from the 10,348 direct Codex labels and 10,348 direct Gemma labels. Candidate is the union of thresholded teacher heads; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels or direct frontier model labels.
Codex and Gemma teacher scores by category
| Category | Codex | Gemma |
|---|---|---|
| Metaresearch | 0.000 | 0.034 |
| Meta-epidemiology (narrow) | 0.000 | 0.000 |
| Meta-epidemiology (broad) | 0.000 | 0.000 |
| Bibliometrics | 0.000 | 0.000 |
| Science and technology studies | 0.000 | 0.000 |
| Scholarly communication | 0.000 | 0.000 |
| Open science | 0.000 | 0.000 |
| Research integrity | 0.000 | 0.000 |
| Insufficient payload (model declined to judge) | 0.986 | 0.002 |
Machine scores (provisional)
The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.
Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.
score_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from itClassification
machine, unvalidatedMachine predicted; both teacher heads agree on what is shown here.
How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".