Additional file 2 of Molecular characterization of Streptococcus suis isolates recovered from diseased pigs in Europe
Bibliographic record
Abstract
Additional file 2. Comparative architecture of cps loci in untypable Streptococcus suis isolates. Illustrated is the genetic organization of the cps loci of the five S. suis untypable isolates, including a comparison to appropriate reference cps loci sequences. Percentage identity to reference sequences is indicated. A) ST28 isolates NSUI00643 and NSUI00644, both recovered in Hungary, possessed some but lacked several key cps genes found in the reference ST28 serotype 2 strain NSUI002 (GenBank accession number CP011419.1). B) ST2796 isolate NSUI00607, recovered in France, possessed some but lacked several key cps genes found in serotype 31 strain 92-4172 (GenBank accession number AB737835.1). C) ST2790 isolate NSUI00477, recovered in the Netherlands, possessed some but lacked several key cps genes found in reference serotype 1 strain 5428 (GenBank accession number JF273644.1). D) ST2798 isolate NSUI00633, recovered in France, possessed some but lacked several key cps genes found in reference serotype 28 strain 89-590 (GenBank accession number AB737832.1).
Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.
How this classification was reachedexpand
Full frame machine prediction
Teacher imitationNot calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.
Distilled classifier scores by category (both heads)
| Category | Codex | Gemma |
|---|---|---|
| Metaresearch | 0.002 | 0.020 |
| Meta-epidemiology (narrow) | 0.001 | 0.000 |
| Meta-epidemiology (broad) | 0.001 | 0.001 |
| Bibliometrics | 0.003 | 0.004 |
| Science and technology studies | 0.001 | 0.000 |
| Scholarly communication | 0.002 | 0.001 |
| Open science | 0.002 | 0.001 |
| Research integrity | 0.001 | 0.001 |
| Insufficient payload (model declined to judge) | 0.836 | 0.149 |
Machine scores (provisional)
The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.
Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.
score_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from itClassification
machine, unvalidatedMachine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.
How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".