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Record W6980252448

Biowire II Platform: High Fidelity Heart-on-a-chip for Drug Screening and Disease Modeling

2019· dissertation· W6980252448 on OpenAlexfundno aff

Bibliographic record

VenueTSpace · 2019
Typedissertation
Language
FieldEnvironmental Science
TopicSpecies Distribution and Climate Change
Canadian institutionsnot available
FundersNatural Sciences and Engineering Research Council of CanadaCanadian Institutes of Health ResearchNational Institutes of HealthCalifornia HIV/AIDS Research Program
KeywordsDrugCardiotoxicityTissue engineeringInduced pluripotent stem cellDrug discoveryDrug actionCell
DOInot available

Abstract

fetched live from OpenAlex

Cardiotoxicity is a major cause of drug failure at the late stages of clinical trials and it is linked to unqualified candidates as early as possible is key for reducing the costs of drug discovery and preventing the patient fatality. Tissue engineering using cardiomyocytes derived from human pluripotent stem cells holds a promise to revolutionize drug discovery, but only if limitations related to tissue maturation, cardiac chamber specification and platform versatility can be overcome. The plastic-based platform developed in this thesis, Biowire II, facilitates the scalable, miniaturized 3D tissue cultivation with multiple cell sources in a low absorption environment. The platform deploys two fluorescent, elastic polymer wires to serve as tissue anchors and force sensors, and enables on-line, non-invasive, recording of passive tension, active force, contractile dynamics, Ca2+ transients, endpoint assessments of action potentials and conduction velocity. The conditions of cardiac tissue formation, including cell seeding density, non-myocyte populations and hydrogels, were characterized in detail to ensure the consistent production of functional tissues with hallmarks of adult myocardium. The temporary electrical pacing and long-term electrical conditioning were incorporated and optimized for the platform to facilitate standardized drug testing and chamber-specific cardiac tissue maturation. By combining directed cell differentiation with electrical field conditioning, we engineered electrophysiologically distinct atrial and ventricular tissues with chamber-specific drug responses and gene expression. This study is the first to report the engineering of the heteropolar cardiac tissues, which contain well-separated atrial and ventricular ends, and demonstrate their spatially confined responses to serotonin and ranolazine. More importantly, Biowire II platform enabled modeling of polygenic left ventricular hypertrophy with induced pluripotent stem cell derived cardiomyocytes from six different patients, using uniquely designed 8-months-long electrical conditioning protocol. The platform was scaled up into a 96 well-plate format with all the key features, such as plastic culture environment, elastic force sensors and embedded carbon electrodes. An innovative fabrication method was developed to rapidly cast suspended force sensors on top of a patterned surface. This advanced version of platform eliminates adhesives, standardizes and further increases the throughput of tissue production and drug testing.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.000
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Bench or experimental · Consensus signal: Bench or experimental
GenreCandidate signal: Empirical · Consensus signal: none
Teacher disagreement score0.005
Threshold uncertainty score0.016

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0000.000
Meta-epidemiology (narrow)0.0010.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0000.000
Science and technology studies0.0000.000
Scholarly communication0.0010.000
Open science0.0010.001
Research integrity0.0010.001
Insufficient payload (model declined to judge)0.0050.002

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.053
GPT teacher head0.322
Teacher spread0.268 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designBench or experimental
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations0
Published2019
Admission routes1
Has abstractyes

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