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Record W6982319614

Incipient stages of collagen mineralization
\nmonitored by atomic force microscopy

2015· dissertation· en· W6982319614 on OpenAlexfundno aff

Bibliographic record

VenueMemorial University Research Repository (Memorial University) · 2015
Typedissertation
Languageen
FieldPhysics and Astronomy
TopicAstrophysical Phenomena and Observations
Canadian institutionsnot available
FundersNatural Sciences and Engineering Research Council of Canada
KeywordsLiquationMatrix (chemical analysis)Raman microscopeLimiting
DOInot available

Abstract

fetched live from OpenAlex

The process of collagen mineralization represents a current challenge in tissue engineering \nand is extensively studied, since collagen and calcium phosphate are the main \nconstituents of natural human bone. In vitro biomineralization of collagen can lead \nto biomaterials which could resemble the bone structure and may be appropriate for \nuse as bone substitutes and implants in medical fields. \nDue to the fact that in vitro mineralization of collagen contributes to the understanding \nof mechanisms of mineralization in vivo, our research focused on the in situ \nmonitoring of the incipient stages of collagen/calcium phosphate composite formation \nas it happened, with the help of atomic force microscopy (AFM). Since AFM \nis an appropriate tool for characterizing the morphologic features of a surface and is \nable to show the modification of the surface by depositions, the effect of calcium and \nphosphate ion concentrations upon the mineralization process of a collagen matrix \nin aqueous medium has been studied and the stimulation of mineral deposition by \ncollagen has been established. Raman spectroscopy enabled us to identify the mineralization \nproducts as well as obtain a qualitative measure of mineralization efficiency. \nAccording to literature, glycosaminoglycans may enhance the efficiency of the collagen \nmineralization. Glucuronic acid, a major component of glycosaminoglycans (e.g. \nhyaluronic acid) in the extracellular matrix, has been previously shown to stimulate \ncollagen mineralization in vitro and to lead to the formation of the desired calcium phosphate phase, i.e. hydroxyapatite. We performed a comparison of glucuronic acid \nwith galacturonic acid (an epimer) which reveals differences in their effects on collagen \nfibrillogenesis. Our approach shows that while the presence of uronic acids in \nthe collagen matrix may build an efficient scaffold for collagen calcification, it also \nbrings modifications to the collagen matrix assembly. Using a surface-induced process \nfor collagen alignment and fibril formation, we can observe changes in fibril and film \nstructure with AFM. \nIn order to gain insight on how the glucuronic acid may potentially affect the \ncollagen matrix during fibrillogenesis, we studied the behaviour of glucuronic acid in \nalkaline and acidic media using AFM. In addition to AFM visualization of the various \npH-dependent aggregates formed by glucuronic acid in solution, our experiments led \nto the synthesis of α-polyglucuronic acid starting from glucuronic acid monomers in \nan acidic solution. The α-polyglucuronic acid fibers were observed by AFM and its \nstructure was confirmed by ¹³C solution NMR.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.000
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Bench or experimental · Consensus signal: Bench or experimental
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.002
Threshold uncertainty score0.005

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0000.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0000.000
Science and technology studies0.0000.000
Scholarly communication0.0000.000
Open science0.0000.000
Research integrity0.0000.001
Insufficient payload (model declined to judge)0.0020.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.019
GPT teacher head0.275
Teacher spread0.256 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designBench or experimental
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations0
Published2015
Admission routes1
Has abstractyes

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