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Record W6983723253

Newt anterior gradient (nAG) protein, a salamander-derived protein, as an inhibitor of TGF-ß signaling and fibrotic responses

2020· dissertation· en· W6983723253 on OpenAlexaff

Bibliographic record

VenueeScholarship@McGill (McGill) · 2020
Typedissertation
Languageen
FieldBiochemistry, Genetics and Molecular Biology
TopicConnective Tissue Growth Factor Research
Canadian institutionsMcGill University
Fundersnot available
KeywordsExtracellular matrixWestern blotConnective tissueFibrosisHypertrophic scarSignal transductionConnective tissue diseaseRegeneration (biology)Wound healing
DOInot available

Abstract

fetched live from OpenAlex

Background: Salamanders have the amazing ability to regenerate their limbs within 30 days when amputated.One of the key proteins responsible for this regeneration is the newt anterior gradient (nAG) protein.A previous study demonstrated that local injection of a recombinant nAG protein reduces hypertrophic scarring in a rabbit ear model.Fibrotic disorders of the skin such as scleroderma, hypertrophic scarring and keloids are characterized by excessive TGF-b action, leading to an increase in deposition of collagen and other extracellular matrix (ECM) components, resulting in functional impairment which is often debilitating.To date, the treatment options remain limited.We hypothesized that nAG protein would inhibit the TGF-b signaling pathway and fibrotic responses in skin fibroblasts of scleroderma patients and may therefore have therapeutic potential for the treatment of scleroderma.The aim of this study is to examine the effectiveness of nAG protein to inhibit fibrotic responses in scleroderma skin fibroblasts and study its regulation of the TGF-b signaling pathway.Methods: Fibroblasts from lesional scleroderma patient skin were treated with nAG protein in doses of 0, 100 pM,1 nM and 10nM for 24 hrs and were then left untreated or treated with 20 pM of TGF-.TGF--mediated pro-fibrotic responses were determined by measuring the levels of ECM (collagen III, Fibronectin), connective tissue growth factor (CTGF/CCN2) and alpha smooth muscle actin (-SMA) protein production by Western blot and immunofluorescence.Also, gene expression at the mRNA level was determined by quantitative PCR.Activation of the TGF- pathway was determined by measuring the TGF- receptor 1 (ALK5) and phosphorylated Smad2/3 levels by using Western blot and immunofluorescence.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame distilled prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. Learned from the 10,348 direct Codex labels and 10,348 direct Gemma labels. Candidate is the union of thresholded teacher heads; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels or direct frontier model labels.

metaresearch head score (Codex)0.001
metaresearch head score (Gemma)0.002
Version: codex-gemma-dda1882f352aValidation status: machine_predicted_unvalidated
Candidate categoriesMeta-epidemiology (narrow)
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Bench or experimental · Consensus signal: Bench or experimental
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.011
Threshold uncertainty score0.999

Codex and Gemma teacher scores by category

CategoryCodexGemma
Metaresearch0.0010.002
Meta-epidemiology (narrow)0.0010.001
Meta-epidemiology (broad)0.0010.000
Bibliometrics0.0000.000
Science and technology studies0.0010.000
Scholarly communication0.0000.000
Open science0.0010.000
Research integrity0.0010.001
Insufficient payload (model declined to judge)0.0000.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.020
GPT teacher head0.277
Teacher spread0.257 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one teacher head, not a consensus.

Study designBench or experimental
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations0
Published2020
Admission routes1
Has abstractyes

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