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Record W6999262539

Characterization of the zinc cluster transcription factor Rds2 in «Saccharomyces cerevisiae» links glucose metabolism to antifungal drug resistance

2011· other· en· W6999262539 on OpenAlexvenueno aff

Bibliographic record

VenueLibrary and Archives Canada (Government of Canada) · 2011
Typeother
Languageen
FieldBiochemistry, Genetics and Molecular Biology
TopicFungal and yeast genetics research
Canadian institutionsnot available
Fundersnot available
KeywordsTranscription factorAntifungal drugRegulatorGlyoxylate cycleGeneGene clusterDrugSaccharomyces cerevisiaeTranscription (linguistics)
DOInot available

Abstract

fetched live from OpenAlex

In Saccharomyces cerevisiae, zinc cluster proteins constitute the major family of transcriptional regulators for a variety of metabolic processes, yet the function of many are currently unknown. Previous studies have characterized Rds2 as a zinc cluster transcription factor that plays a role in antifungal drug resistance, but an exact mechanism is undefined. However, it has been established that Rds2 is a major regulator of gluconeogenesis. In this study, we aim to further mechanistically characterize the role of Rds2 in antifungal drug resistance. Microarray-based expression profiling of both wild type and ∆rds2 strains treated with ketoconazole indicates a greater than 2-fold decreased expression of genes involved in gluconeogenesis and the glyoxylate cycle, such as PCK1, YIG1, and MLS1, in cells lacking Rds2. Quantitative real-time polymerase chain reaction (qPCR) confirmed our microarray data. Furthermore, deletion of these metabolic genes confers azole hypersensitivity. Our preliminary results show that Rds2's role as a regulator of gluconeogenesis and the glyoxylate cycle is linked to its role in antifungal drug resistance.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.000
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Bench or experimental · Consensus signal: Bench or experimental
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.006
Threshold uncertainty score0.013

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0000.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0000.000
Science and technology studies0.0000.000
Scholarly communication0.0000.000
Open science0.0000.000
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0010.001

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.004
GPT teacher head0.159
Teacher spread0.156 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designBench or experimental
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations0
Published2011
Admission routes1
Has abstractyes

Explore more

Same venueLibrary and Archives Canada (Government of Canada)→Same topicFungal and yeast genetics research→French-language works237,207→