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Record W7005559252

Regulation of the intestinal smooth muscle cell phenotype by the antifibrotic drug nintedanib

2021· dissertation· en· W7005559252 on OpenAlexaff

Bibliographic record

VenueQSpace (Queen's University Library) · 2021
Typedissertation
Languageen
FieldBiochemistry, Genetics and Molecular Biology
TopicLepidoptera: Biology and Taxonomy
Canadian institutionsQueen's University
Fundersnot available
KeywordsSignal transductionTyrosine kinaseImmune systemMechanism (biology)Cell
DOInot available

Abstract

fetched live from OpenAlex

The phenotype of the intestinal smooth muscle cell (ISMC) is typically contractile and non- proliferative, but this can be modulated to allow for proliferation as a wound repair mechanism. While phenotypic modulation of ISMC is normal, chronic inflammation causes excessive proliferation of ISMC, which can contribute to the pathophysiology of inflammatory bowel diseases (IBD). Particularly, in Crohn’s disease (CD), as a consequence of ISMC hyperplasia and extracellular matrix (ECM) collagen deposition, intestinal strictures may arise, ultimately leading to obstruction. Since there are minimal effective treatment options for intestinal strictures, we explored the effects of a multimodal tyrosine kinase inhibitor, nintedanib (NIND), which was recently approved for idiopathic pulmonary fibrosis (IPF), a chronic and fatal lung condition resembling CD. High-passage adult rat ISMC were used in vitro as a model system to study the growth and phenotypic changes that occur in the inflamed intestine. NIND successfully suppressed growth of ISMC but was ineffective against intestinal epithelial cells (IEC), showing selectivity towards cells of the mesenchymal origin. Interestingly, NIND showed protracted inhibition of growth, and pretreated cells grew at a slower rate after subculturing, suggesting heritable effects. Additionally, NIND induced collagen secretion in ISMC, showing that its multimodal capabilities can contribute to wound repair. Further, NIND treatment upregulated smooth muscle contractile marker expression in high-passage ISMC. Finally, and importantly, we showed that the proinflammatory cytokines, IL1β/TNFα, stimulate cytokine production in ISMC, causing a positive feedback loop, and this can be controlled with NIND treatment. Overall, these findings provide evidence that NIND controls the phenotype of ISMC, and because these changes are heritable, the effects of NIND may be associated with epigenetic changes. The effect of NIND on ISMC elucidates its role as a therapy for intestinal strictures, through restoring contractility, and improving intestinal motility.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.000
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Bench or experimental · Consensus signal: Bench or experimental
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.001
Threshold uncertainty score0.002

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0000.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0000.000
Science and technology studies0.0000.000
Scholarly communication0.0000.000
Open science0.0000.000
Research integrity0.0000.001
Insufficient payload (model declined to judge)0.0010.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.004
GPT teacher head0.171
Teacher spread0.167 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designBench or experimental
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations0
Published2021
Admission routes1
Has abstractyes

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