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Record W7005778413

The role of the cystic fibrosis transmembrane conductance regulator in host protection against «Citrobacter rodentium» intestinal infection

2016· dissertation· en· W7005778413 on OpenAlexaff

Bibliographic record

VenueeScholarship@McGill (McGill) · 2016
Typedissertation
Languageen
FieldBiochemistry, Genetics and Molecular Biology
TopicDNA and Biological Computing
Canadian institutionsMcGill University
Fundersnot available
KeywordsCystic fibrosisCystic fibrosis transmembrane conductance regulatorImmune systemMyeloidIntestinal epitheliumTransmembrane proteinΔF508Pancreatic diseaseCellEpithelium
DOInot available

Abstract

fetched live from OpenAlex

Cystic fibrosis (CF) is a fatal disease caused by mutations in the cystic fibrosis transmembrane conductance regulator (CFTR) gene.Located in the membrane of various epithelial tissues and immune cells, CFTR plays a critical role in ion and fluid homeostasis.Although often associated with a respiratory phenotype, CF affects the gastrointestinal tract.Mouse models of CF display little lung pathology, but do possess an intestinal phenotype, characterized by obstruction, inflammation, and bacterial overgrowth.We have shown that F508 CF mice (Cftr tm1Eur ) are highly susceptible to intestinal infection with Citrobacter rodentium, with atypical localization and greater colonization of bacteria than WT mice.Notably, there are significantly more neutrophils in the small intestine of CF mice both at steady state and following infection.Despite this increase, we have shown that CF neutrophils are defective in reactive oxygen species (ROS) production and have decreased apoptosis compared to WT. CF mice also have altered Wnt signaling at steady state, with increased active -catenin in the intestinal stromal cell compartment.To determine the relative contributions of the Cftr-deficient myeloid and epithelial cell compartments to infection susceptibility, we generated mice with myeloid-specific Cftr inactivation.Myeloid-Cftr -/-mice were resistant to infection with no defects in myeloid cell ROS production or apoptosis.We are now generating mice with Cftr inactivation in the intestinal epithelium, to test the hypothesis that functional CFTR mediates its protection in an intestinal epithelial cell dependent manner.C. rodentium infection provides a model to study intestinal disease observed in CF patients.Furthermore, the lack of a robust mouse model of CF pulmonary disease renders our research important for the study of the role of CFTR at mucosal surfaces.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame distilled prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. Learned from the 10,348 direct Codex labels and 10,348 direct Gemma labels. Candidate is the union of thresholded teacher heads; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels or direct frontier model labels.

metaresearch head score (Codex)0.001
metaresearch head score (Gemma)0.001
Version: codex-gemma-dda1882f352aValidation status: machine_predicted_unvalidated
Candidate categoriesMeta-epidemiology (narrow)
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Bench or experimental · Consensus signal: Bench or experimental
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.055
Threshold uncertainty score1.000

Codex and Gemma teacher scores by category

CategoryCodexGemma
Metaresearch0.0010.001
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0000.000
Science and technology studies0.0010.000
Scholarly communication0.0000.000
Open science0.0000.000
Research integrity0.0010.001
Insufficient payload (model declined to judge)0.0000.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.008
GPT teacher head0.212
Teacher spread0.204 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one teacher head, not a consensus.

Study designBench or experimental
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations0
Published2016
Admission routes1
Has abstractyes

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