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Record W7020729068

MicroRNA-135a regulation of sodium calcium exchanger gene expression in cardiomyocytes

2017· dissertation· en· W7020729068 on OpenAlexfundno aff

Bibliographic record

VenueeScholarship@McGill (McGill) · 2017
Typedissertation
Languageen
FieldMedicine
TopicCardiac electrophysiology and arrhythmias
Canadian institutionsnot available
FundersCanadian Institutes of Health ResearchHeart and Stroke Foundation of Canada
KeywordsSodium-calcium exchangerContext (archaeology)microRNAGene expressionLuciferaseMyocyteMicroarray analysis techniquesMicroarrayMessenger RNA
DOInot available

Abstract

fetched live from OpenAlex

MicroRNAs (miRNAs) are key regulators of cardiac electrical and structural remodeling and are implicated in pathologies such as arrhythmias, ischemic heart disease and hypertrophy. miRNA expression has yet to be studied in the context of complete atrioventricular block (CAVB) and the subsequent bradycardic arrhythmogenic remodeling. A time course microarray and RT-qPCR analysis of left ventricular miRNA expression in a mouse CAVB model revealed a strong, early and sustained reduction in miR-135a over 4 weeks, a miRNA unexplored in the cardiovascular field. Several other miRNAs were differentially expressed by 4 weeks post-CAVB as well.To better understand the role of miR-135a in the cardiomyocyte, we identified relevant target genes using literature searches and prediction algorithms, followed by biological confirmation using miR-135a overexpression with luciferase assays, real time qPCR and Western blot. Na+-Ca2+ exchanger 1 (NCX1), encoded by the gene SLC8A1, was identified as a regulated gene; miR-135a overexpression reduced NCX1 3'UTR luciferase reporter activity (-42%) and NCX1 mRNA (-47%) and protein (-35%) expression. Given the significance of NCX1 activity in automaticity and Ca2+ handling in neonatal cardiomyocytes, we sought to investigate the functional effects of miR-135a overexpression in spontaneously beating primary neonatal rat ventricular myocytes (NRVMs). 72-hour overexpression of miR-135a reduced spontaneous beating frequency at 33oC from 147±8 bpm (negative control) to 55±6 bpm, and caused beat-to-beat interval irregularities. Ca2+ transient measurements (fura-2 AM) demonstrated no miR-135a associated alterations when NRVMs were electrically stimulated at 2 Hz; however, rapid application of 20-mM caffeine revealed an increase in decay time constant (+54%) in miR-135a NRVMs. Additionally, the Ca2+ overloading toxic effects of 100-µM ouabain, a cardiac glycoside reliant on NCX1 activity, was eliminated by miR-135a overexpression, further reducing potentially arrhythmogenic spontaneous Ca2+ release events (SCREs). The findings of this study illustrate that miR-135a overexpression negatively regulates NCX1 expression, leading to alterations of NRVM automaticity, Ca2+ extrusion rate, arrhythmogenic Ca2+ loading and SCREs. miR-135a may contribute to pro-arrhythmic remodeling following CAVB.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.000
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Bench or experimental · Consensus signal: Bench or experimental
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.001
Threshold uncertainty score0.003

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0000.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0000.000
Science and technology studies0.0000.000
Scholarly communication0.0000.000
Open science0.0000.000
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0010.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.019
GPT teacher head0.270
Teacher spread0.251 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designBench or experimental
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations0
Published2017
Admission routes1
Has abstractyes

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