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Record W7028435209

Gene-wide analysis detects two new susceptibility genes for Alzheimer's disease.

2014· article· en· W7028435209 on OpenAlexfundno aff

Bibliographic record

VenueArrow@dit (Dublin Institute of Technology) · 2014
Typearticle
Languageen
FieldMedicine
TopicAlzheimer's disease research and treatments
Canadian institutionsnot available
FundersNational Center for Advancing Translational SciencesNational Institute of Diabetes and Digestive and Kidney DiseasesNational Institute of Allergy and Infectious DiseasesNational Human Genome Research InstituteNational Institute of Mental HealthNational Institute on AgingInstituto de Salud Carlos IIIMenzies Centre for Australian Studies, King's College London, University of LondonUniversity of California, San FranciscoNational Institutes of HealthHeinz Nixdorf StiftungHjartaverndH. Lundbeck A/SKarl-Franzens-Universität GrazUniversity of PennsylvaniaAustrian Science FundMedizinische Universität GrazInternationale Stichting Alzheimer OnderzoekNational Institute of Child Health and Human DevelopmentHersenstichtingMedical Research CouncilSwedish Brain PowerNational Institute of Neurological Disorders and StrokeLlywodraeth CymruDeutsches Zentrum für Neurodegenerative ErkrankungenNational Heart, Lung, and Blood InstituteNorth Bristol NHS TrustUniversity of California, DavisVetenskapsrådetUniversity of PittsburghStockholms Läns LandstingMarcus och Amalia Wallenbergs minnesfondErasmus Medisch CentrumBundesministerium für Bildung und ForschungKarolinska InstitutetZonMwSchool of Medicine, Boston UniversityEuropean CommissionCentro de Biología Molecular Severo OchoaCardiff UniversityAlzheimer's Research TrustUniversity of California, IrvineUniversity College London Hospitals NHS Foundation TrustUniversity of California, Los AngelesUniversity of WashingtonUniversity of California, San DiegoJohns Hopkins UniversityNational Institute on Deafness and Other Communication DisordersRush UniversityUniversity of MiamiYork UniversityNorthwestern UniversityMinistero della SaluteAlzheimer's SocietyNational Institute for Health and Care ResearchAlzheimer SocietyNewcastle UniversityVanderbilt UniversityWellcome TrustUniversity of Southern CaliforniaMassachusetts General HospitalEmory UniversityJuvenile Diabetes Research Foundation International
KeywordsGeneGenetic associationGenotypeDiseaseImmune systemGenomicsGenetic predisposition
DOInot available

Abstract

fetched live from OpenAlex

BACKGROUND:\n\nAlzheimer's disease is a common debilitating dementia with known heritability, for which 20 late onset susceptibility loci have been identified, but more remain to be discovered. This study sought to identify new susceptibility genes, using an alternative gene-wide analytical approach which tests for patterns of association within genes, in the powerful genome-wide association dataset of the International Genomics of Alzheimer's Project Consortium, comprising over 7 m genotypes from 25,580 Alzheimer's cases and 48,466 controls.\nPRINCIPAL FINDINGS:\n\nIn addition to earlier reported genes, we detected genome-wide significant loci on chromosomes 8 (TP53INP1, p = 1.4×10-6) and 14 (IGHV1-67 p = 7.9×10-8) which indexed novel susceptibility loci.\nSIGNIFICANCE:\n\nThe additional genes identified in this study, have an array of functions previously implicated in Alzheimer's disease, including aspects of energy metabolism, protein degradation and the immune system and add further weight to these pathways as potential therapeutic targets in Alzheimer's disease.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame distilled prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. Learned from the 10,348 direct Codex labels and 10,348 direct Gemma labels. Candidate is the union of thresholded teacher heads; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels or direct frontier model labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.001
Version: codex-gemma-dda1882f352aValidation status: machine_predicted_unvalidated
Candidate categoriesMeta-epidemiology (narrow)
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Observational · Consensus signal: none
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.558
Threshold uncertainty score1.000

Codex and Gemma teacher scores by category

CategoryCodexGemma
Metaresearch0.0000.001
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0010.001
Bibliometrics0.0010.002
Science and technology studies0.0000.001
Scholarly communication0.0000.000
Open science0.0010.000
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0000.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.090
GPT teacher head0.372
Teacher spread0.282 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one teacher head, not a consensus.

Study designObservational
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations0
Published2014
Admission routes1
Has abstractyes

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