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Record W7039523678

Molecular mechanisms underlying the pathogenesis of Leigh Syndrome French Canadian

2019· dissertation· en· W7039523678 on OpenAlexfundaboutno aff

Bibliographic record

VenueeScholarship@McGill (McGill) · 2019
Typedissertation
Languageen
FieldBiochemistry, Genetics and Molecular Biology
TopicMitochondrial Function and Pathology
Canadian institutionsnot available
FundersMcGill University
KeywordsPentatricopeptide repeatMitochondrionMitochondrial DNAMitochondrial diseasemitochondrial fusionGenePhenotypeMissense mutation
DOInot available

Abstract

fetched live from OpenAlex

Functional mitochondria are required for cellular fitness and for generating ATP through oxidative phosphorylation (OXPHOS) pathway.Impaired mitochondrial function is associated with neurodegenerative disorders such as Leigh Syndrome French Canadian (LSFC), an earlyonset autosomal recessive disease common in a small northern region of Quebec, Saguenay Lac Saint Jean.The causative gene is located on chromosome 2 and encodes Leucine Rich Pentatricopeptide Repeat containing protein (LRPPRC), a Pentatricopeptide Repeat (PPR) protein localized in mitochondria.The exact function of LRPPRC remains to be elucidated, but in vivo studies have revealed that LRPPRC forms a complex with Steroid Receptor RNA activator stem loop interacting RNA binding protein (SLIRP), and this complex is required for mitochondrial mRNA stability.Biochemically, an LSFC subject carrying the founder missense mutation in LRPPRC (p.A354V) demonstrated a very heterogenous phenotype in different tissues.The work presented in this thesis first elaborates the impact of LRPPRC deficiency on mitochondrial function in liver-specific LRPPRC knock-out mice.We showed that the loss of LRPPRC caused a generalized growth delay and typical histological features of mitochondrial hepatopathy.At the molecular level, LRPPRC deficiency caused destabilization of a number of polyadenylated mitochondrial mRNAs and a severe complex IV and complex V (ATP synthase) assembly defect.The impact of LRPPRC deficiency was not limited to OXPHOS, but also included the impairment of long-chain fatty acid oxidation, a striking dysregulation of the mitochondrial permeability transition pore, and an alteration of trans-membrane H2O2 diffusion, which could result from the ATP synthase assembly defect and changes in the lipid composition of mitochondrial membranes.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.000
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Bench or experimental · Consensus signal: Bench or experimental
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.840
Threshold uncertainty score0.318

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0000.000
Meta-epidemiology (narrow)0.0010.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0010.001
Science and technology studies0.0010.001
Scholarly communication0.0000.000
Open science0.0000.000
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0040.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.015
GPT teacher head0.232
Teacher spread0.216 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designBench or experimental
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations0
Published2019
Admission routes2
Has abstractyes

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