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Record W7039861060

Novel inhibitors of phosphate-binding enzymes as potential human therapeutics

2017· dissertation· en· W7039861060 on OpenAlexafffund

Bibliographic record

VenueeScholarship@McGill (McGill) · 2017
Typedissertation
Languageen
FieldEngineering
TopicEngineering and Test Systems
Canadian institutionsMcGill University
FundersNatural Sciences and Engineering Research Council of CanadaCanadian Institutes of Health ResearchFonds Québécois de la Recherche sur la Nature et les Technologies
KeywordsDrug discoveryEnzymeDruggabilityAllosteric regulationProdrugPyrophosphateMechanism of actionActive siteBinding site
DOInot available

Abstract

fetched live from OpenAlex

Studies on the discovery and development of small-molecule enzyme inhibitors are continuously growing due to their application as drugs for essentially every type of human disease, including cancer, metabolic, cardiovascular, neurodegenerative, and infectious diseases.However, the design of high affinity and membrane permeable inhibitors for phosphate-or pyrophosphatebinding enzymes with highly charged and metal-dependent active site pockets, such as the HIV-1 reverse transcriptase (HIV-1 RT) and the human geranylgeranyl pyrophosphate synthase (hGGPPS), poses a significant challenge in medicinal chemistry.In the past, the problems associated with this class of biological targets have been overcome with the development of effective phosphate or pyrophosphate bioisosteres and prodrugs or through the discovery of allosteric inhibitors.Guided by several successful incorporations of phosphate and pyrophosphate mimics, our studies were dedicated to the following: (1) identification and development of bona fide active site inhibitors of HIV-1 RT with a mechanism of action that is uniquely different from the currently known anti-HIV/AIDS drugs, and (2) discovery of potent and selective inhibitors of hGGPPS that can be used as molecular probes to investigate the role of hGGPPS in human diseases.The design, synthesis, and preliminary biological profiling of these novel compounds will be discussed.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.000
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Bench or experimental · Consensus signal: Bench or experimental
GenreCandidate signal: Empirical · Consensus signal: none
Teacher disagreement score0.008
Threshold uncertainty score0.026

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0000.000
Meta-epidemiology (narrow)0.0010.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0000.000
Science and technology studies0.0000.000
Scholarly communication0.0010.000
Open science0.0000.000
Research integrity0.0000.001
Insufficient payload (model declined to judge)0.0080.002

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.016
GPT teacher head0.240
Teacher spread0.224 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designBench or experimental
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations0
Published2017
Admission routes2
Has abstractyes

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