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Record W7046373149

Characterization of Eukaryotic Translation Initiation Factor 5A-2 (eIF5A-2) in <i>Arabidopsis thaliana</i>: Effects of Wounding and Pathogen Attack

2006· dissertation· en· W7046373149 on OpenAlexaff

Bibliographic record

VenueUWSpace (University of Waterloo) · 2006
Typedissertation
Languageen
FieldPhysics and Astronomy
TopicMagnetic confinement fusion research
Canadian institutionsBlackberry (Canada)University of Waterloo
Fundersnot available
KeywordsTranslation (biology)PathogenEukaryotic initiation factorGene isoformSignal transductionInitiation factorMessenger RNAEukaryotic translationProgrammed cell deathVirulence factor
DOInot available

Abstract

fetched live from OpenAlex

Plants respond to wounding and pathogen ingress by synthesizing defence proteins that facilitate wound healing, cell death or provide protection against further pathogen attack. The accumulation of these proteins is mainly due to rapid transcriptional activation of corresponding genes, though preliminary evidence implies that translational control may also have a role in the stress response. This study focuses on the function of Arabidopsis thaliana eukaryotic translation initiation factor 5A (eIF5A) in mechanical wounding and during infection with the phytopathogen Pseudomonas syringae. Recent evidence suggests that eIF5A acts as a nucleo-cytoplasmic shuttling protein that facilitates mRNA translation through selective transport from the nucleus. Three isoforms of eIF5A have been identified and isolated in Arabidopsis thaliana, suggesting that each distinct isoform may be involved in transport of different subsets of mRNA required for a specific physiological event. The analysis in this study revealed that the eIF5A-2 isoform appears to be involved in the signal transduction pathways that result in cell death following virulent infection, systemic acquired resistance and wounding in Arabidopsis thaliana. Transgenic plants with reduced expression of eIF5A-2 were developed using antisense T-DNA insertion. These lines have shown marked resistance to Pseudomonas syringae pv tomato DC3000, exhibiting up to 99% decrease of bacteria in planta and cell death associated with disease. The capacity to effectively limit growth of various pathogens is important for the design of strategies to improve disease resistance in crops. Development of disease-resistant lines allows efficient crop production with reduced reliance on environmentally undesirable toxic agrichemicals.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.000
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Bench or experimental · Consensus signal: Bench or experimental
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.002
Threshold uncertainty score0.004

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0000.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0000.000
Science and technology studies0.0000.000
Scholarly communication0.0000.000
Open science0.0000.000
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0010.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.011
GPT teacher head0.215
Teacher spread0.204 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designBench or experimental
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations0
Published2006
Admission routes1
Has abstractyes

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