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Record W7055884849

Developmental expression analysis and RNA interference (RNAi) screen of putative neuromuscular receptors of «Schistosoma mansoni»

2014· dissertation· en· W7055884849 on OpenAlexaff

Bibliographic record

VenueeScholarship@McGill (McGill) · 2014
Typedissertation
Languageen
FieldMaterials Science
TopicThermal properties of materials
Canadian institutionsMcGill University
FundersMinistry of Education, India
KeywordsReceptorRNA interferencePhenotypeRNASchistosoma mansoniMotilityFunction (biology)G protein-coupled receptor
DOInot available

Abstract

fetched live from OpenAlex

In parasitic platyhelminths, including Schistosoma mansoni the coordination of neuromuscular system is critical for continued propagation, development and successful completion of the lifecycle.Neuromuscular signaling in these parasites is mediated by a variety of neurotransmitters, both small molecules ("classical") transmitters and neuropeptides.Biogenic amines (BA) constitute the largest subset of classical neurotransmitters and play several key roles in the control of schistosome muscle function and movement.There are several putative BA receptors identified in the S. mansoni genome, the majority of which are Class A G protein coupled receptors (GPCRs).Here we report the functional role of these putative BA receptors in parasite development and motility by developmental expression analysis and RNAi screening.We performed an expression analysis of several putative BA receptors at the RNA level in different developmental stages of the parasite, using reverse-transcription coupled to quantitative PCR (RT-qPCR).One of these proteins is a previously described serotonin receptor of S. mansoni (named Sm5HTR) and the others are novel "orphan" BA-like receptors.The analysis showed that the BA receptors tested are expressed in all developmental stages, however the majority are preferentially expressed in cercaria and schistosomula, suggesting these receptors play particularly important roles in parasite larvae.Next we performed RNA interference (RNAi) targeting the same BA receptors by transfecting S.mansoni larvae with small interfering RNA (siRNA) and analyzed for effects on motor activity by comparing with the control groups.Given that BAs are known modulators of schistosome movement, we hypothesized that the RNAi would produce a motor phenotype in the larvae and this was confirmed by the data.The results identified strongly hypoactive phenotypes for three out of four receptors tested, including Sm5HTR (Smp_126730), Smp_150180 and Smp_120620), all showing significant reduction in movement compared to control larvae transfected with irrelevant (scrambled) siRNAs.The RNAi phenotype correlated with a significant and specific knockdown in transcript levels as determined by RT-qPCR.To elucidate the mode of action of Sm5HTR we also performed confocal immunolocalization analysis using a specific peptide iii antibody.The expression pattern suggests Sm5HTR is highly abundant in the central and peripheral nervous system of the parasite, including the peripheral innervation of the body wall muscles responsible for movement.Together the results suggest that Sm5HTR and other BA receptors play an important role in the control of schistosome motility, particularly the larvae, and could be potential targets for new drug discovery.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame distilled prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. Learned from the 10,348 direct Codex labels and 10,348 direct Gemma labels. Candidate is the union of thresholded teacher heads; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels or direct frontier model labels.

metaresearch head score (Codex)0.001
metaresearch head score (Gemma)0.001
Version: codex-gemma-dda1882f352aValidation status: machine_predicted_unvalidated
Candidate categoriesMeta-epidemiology (narrow), Insufficient payload (model declined to judge)
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Bench or experimental · Consensus signal: Bench or experimental
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.013
Threshold uncertainty score1.000

Codex and Gemma teacher scores by category

CategoryCodexGemma
Metaresearch0.0010.001
Meta-epidemiology (narrow)0.0010.001
Meta-epidemiology (broad)0.0020.000
Bibliometrics0.0010.000
Science and technology studies0.0000.000
Scholarly communication0.0000.001
Open science0.0010.000
Research integrity0.0010.000
Insufficient payload (model declined to judge)0.0010.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.014
GPT teacher head0.227
Teacher spread0.212 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one teacher head, not a consensus.

Study designBench or experimental
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations0
Published2014
Admission routes1
Has abstractyes

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