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Record W7067788522

Molecular characterization of rat cardiac sarcolemmal Ca2S+/Mg2S+ ecto-ATPase

2007· other· en· W7067788522 on OpenAlexfundvenueno aff

Bibliographic record

VenueLibrary and Archives Canada (Government of Canada) · 2007
Typeother
Languageen
FieldMedicine
TopicMosquito-borne diseases and control
Canadian institutionsnot available
FundersMedical Research CouncilMedical Research Council Canada
KeywordsComplementary DNAMolecular massAntiserumPeptide sequenceMolecular cloningcDNA librarySkeletal muscleAmino acidPolyclonal antibodies
DOInot available

Abstract

fetched live from OpenAlex

Sarcolemmal Ca$\\sp{2+}$/Mg$\\sp{2+}$ ecto-ATPase (Myoglein; MW 180 kD) is a membrane bound enzyme which requires millimolar concentrations of either Ca$\\sp{2+}$ or Mg$\\sp{2+}$ for maximal hydrolysis of ATP. In order to elucidate the structural and functional properties of the rat cardiac sarcolemmal Ca$\\sp{2+}$/Mg$\\sp{2+}$ ecto-ATPase, this protein was purified to homogeneity and utilized for the biophysical, molecular and immunochemical characterization. Mass spectroscopic analysis of the enzyme using different matrix combinations revealed the presence of multi-components indicating microheterogeneity in the protein structure. Treatment of the ecto-ATPase with DL-dithiothreitol did not alter the pattern of mass spectroscopic analysis and this indicated that the microheterogeneity may be due to some posttranslational modifications. For determining the molecular structural properties, the purified Ca$\\sp{2+}$/Mg$\\sp{2+}$ ecto-ATPase was subjected to tryptic digestion and amino acid sequencing. The amino acid sequence was utilized to design an oligonucleotide probe. Screening of a rat heart cDNA library produced a partial cDNA clone (pND2.1) that was 100% homologous to human platelet CD36. A high degree of homology ($>$70%) with other cell adhesion molecules was also noted. The oligomer probe detected a 4.4 kB transcript in heart, brain, spleen, lung, liver, skeletal muscle, kidney, and testis. An additional 3.1 kB transcript was detectable in heart, lung, liver and skeletal muscle while transcripts of $\\sim$2.0 kB and $\\sim$1.0 kB were also evident in the heart whereas ND2.1 detected a $\\sim$3.1 kB transcript in cardiac tissue. To determine the immunochemical properties of the rat cardiac Ca$\\sp{2+}$/Mg$\\sp{2+}$ ecto-ATPase, a polyclonal antiserum was raised against purified $\\rm Ca\\sp{2+}$/Mg$\\sp{2+}$ ecto-ATPase. As assessed by Western blot analysis, the antiserum as well as the purified immunoglobulin were specific for Ca$\\sp{2+}$/Mg$\\sp{2+}$ ATPase; no crossreaction was observed towards other membrane bound enzymes such as rat sarcoplasmic reticulum Ca$\\sp{2+}$-pump ATPase or plasma membrane Ca$\\sp{2+}$-pump ATPase On the other hand, the cardiac Ca$\\sp{2+}$/Mg$\\sp{2+}$ ATPase was not recognized by either rat SR Ca$\\sp{2+}$ ATPase or liver ecto-ATPase (Ca$\\sp{2+}$/Mg$\\sp{2+}$ ATPase) antibodies. In this study, we have produced an antiserum which is specific for plasma membrane Ca$\\sp{2+}$/Mg$\\sp{2+}$ ecto-ATPase in cardiocytes. This antiserum can localize the plasma membrane of cardiomyocytes as well as brain, skeletal muscle, liver and kidney. Western immunoblots revealed that a polyclonal antiserum raised against the purified cardiac Ca$\\sp{2+}$/Mg$\\sp{2+}$ ecto-ATPase in rabbit recognized the CD36 molecule, whereas a monoclonal antibody directed against human CD36 cross-reacted with cardiac Ca$\\sp{2+}$/Mg$\\sp{2+}$ ecto-ATPase, in cardiac plasma membrane preparation. On the basis of these observations, the role of the Ca$\\sp{2+}$/Mg$\\sp{2+}$ ecto-ATPase in cell adhesion phenomenon was tested by carrying out a cell-cell adhesion bioassay in neonatal cardiomyocyte culture. The purified IgG fraction of the anti-cardiac Ca$\\sp{2+}$/Mg$\\sp{2+}$ ecto-ATPase serum was found to depress the spreading and attachment of cardiomyocytes to their substratum. These results suggest that the rat cardiac Ca$\\sp{2+}$/Mg$\\sp{2+}$ ecto-ATPase is an acidic protein having two subunits. Furthermore, Ca$\\sp{2+}$/Mg$\\sp{2+}$ ecto-ATPase shows microheterogeneity in its molecular structure. It is concluded that rat cardiac Ca$\\sp{2+}$/Mg$\\sp{2+}$ ecto-ATPase may either contain a fragment with cell adhesion properties or is tightly associated with a protein which is homologous to the adhesion molecule CD36. (Abstract shortened by UMI.)

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.000
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Bench or experimental · Consensus signal: Bench or experimental
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.001
Threshold uncertainty score0.004

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0000.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0000.000
Science and technology studies0.0000.000
Scholarly communication0.0000.000
Open science0.0000.000
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0010.001

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.002
GPT teacher head0.150
Teacher spread0.148 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designBench or experimental
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations0
Published2007
Admission routes2
Has abstractyes

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